Spirosoma linguale: Slin_2412
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Entry
Slin_2412 CDS
T01156
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_2412
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_2412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
CooC_C
Motif
Other DBs
NCBI-GeneID:
8726156
NCBI-ProteinID:
ADB38432
UniProt:
D2QFQ8
LinkDB
All DBs
Position
2909307..2912396
Genome browser
AA seq
1029 aa
AA seq
DB search
MPFSTTSSAQSKIGWLVGLLLVLELSALAQSNRPVTVSGLVTSAESSQGIPGANVMVKNT
QQGTTTNANGEFTLAAPAGSLVLIVSSIGFQTQEVPVSGQSKLTIALQADNRSLNEVIVV
GYGTVKKSDLTGSVSSVRAAELKQTPIANFVQGLQARASGVQVTQNSGAPGGSISVRIRG
NNSISGSSEPLYVVDGFPIAGGDNPVAGGGSGLGNDNGNRLSVLSTLNPNDIESMEVLKD
ASATAIYGTRGANGVVLITTKRGKSGKTRVSYDGYYGQQQIRKTLDVMNATQFAKYENEI
TGTQLYPNPDQLGQGTDWQSLIFRKAPMQSHQLSVSGGNERSQFALSMNYFDQDGIIINS
NFKRGSVRVNLDNTISKNLKIGTSLTYTYSVNNGAITATLGDGGPAGGIILSALTAPPVF
SPYNADGSPTIFTNRYLDLNNPVALATEVMNRNTTRRFLGNIFADWTITNGLTYRASFGG
DLVTDTRDSYVTRNIRAGSQVNGIGGKGNANTNTVLHESLLNYHRLFGVHDVNVTGVFST
QGQLQTADAMTGQQFPNDLVLNNNLSQASILTIASNKQAWRLDSYTGRINYNYKSKYLLT
LTGRVDGSSRFGDNNKYGFFPSVAGAWRVSEEGFMQGQQVLSDLKLRASYGITGNADIPL
YNSLSRLNSVGNYNFNNVRTIGIAAANISNPDLKWEKSAQADIGLDFGLLNNRIQVTADV
YYKKTTDLLLSRTIPLSSGFGSVFGNFGSVENRGIEVTVNAGVLNGPLKWDINGNISANR
NKLTLIDGTRTEIIPGGGDASIGAFTNNSILRVGAPIGSFYGYVFDGIYQTGDNIPTGRI
PGNIRYRDLNGDGVISGADQTIIGNPNPSYIFGINNTLKYKGFDLSLFVQGVQGNQIFAV
SRVRLEAGAGAINQYATYVNRWTSTNPSNQYLKASTGQRVNQSDIHIEDGSFVRFKNITL
GYTIPAAGKLAWLANSRVYVSANNFATLTNYSGYDPEVNTAGQNNLNLGVDNIGFPVSKS
FIAGLQLNF
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgccattttctaccactagttcagcccagtcaaaaatcgggtggctcgtaggcctgctg
ctcgtactggagctgtctgcgctggcccaatcgaaccggcccgttacggtcagcggtctg
gttacctcagccgaaagtagccagggaatacccggcgccaacgttatggttaaaaacacc
cagcaaggcacgacgaccaacgccaacggggagtttacgctggcagccccggcgggttca
cttgtgctgatcgtatcgtcgattggcttccagacacaggaagtaccggtttcgggccag
agcaagctaaccatcgccctgcaagccgataatcgttcattgaacgaggtcatcgttgtc
ggctacggtacggtaaagaagagcgacttaaccggctcggtttcatcagtgagagccgct
gaactaaaacaaactccgattgccaacttcgttcagggtcttcaggcccgggcttcgggg
gtgcaggttacacagaactcaggcgcaccggggggcagcatcagcgttcgcattcggggc
aataactcgattagcggcagcagcgaaccgctctatgtagtcgacggattccccattgcc
gggggcgacaacccggtggcggggggcggcagcggactcggaaatgacaatggcaaccgg
ctctcggtgctttctacgttgaaccccaacgatattgagtcgatggaggtgctgaaagat
gcctcggccaccgctatttacggcacgcgtggggccaatggcgtagtgttgattacgacc
aaacggggtaaatccggcaaaacccgcgtgagctatgacggctattacgggcagcagcaa
atccgaaaaacgctggatgtaatgaacgccacgcagtttgccaagtacgaaaacgaaatt
accggtacgcaactttatcccaatcccgatcaattagggcagggtaccgactggcagtcg
cttattttccgcaaagcccctatgcagagccaccagctatccgtatcgggcggcaacgaa
cgctcgcagttcgcgctgtcgatgaattatttcgatcaggacgggatcatcattaactcc
aacttcaagcggggatcggtgcgggtcaatctggataatacgatcagtaaaaaccttaaa
ataggcacgagcctgacctatacctactccgtcaacaatggagccattaccgccacgctg
ggcgatggtggtccggcggggggaattattttgtcggcacttacggctccgcccgtcttt
tccccctacaatgccgacggttcaccgactattttcacaaaccgctacctggacctcaac
aaccccgttgcgctggctacggaggtgatgaaccggaacacaacccgccgttttctgggt
aacatctttgccgactggaccattaccaatggcttaacttaccgggcttcgtttgggggc
gatctcgttacggacacccgcgactcatacgttacccgcaacatccgggcgggttcgcag
gtgaacggcattggcggaaaagggaatgccaacaccaatacggtactgcacgagagtctg
ctgaattaccatcggctgtttggtgtgcatgatgtaaacgtgaccggcgtgttttcgacc
caggggcagctacaaactgccgatgccatgaccggtcagcaatttcccaacgaccttgtg
ctgaacaataacctctcgcaggcatccattttaaccattgccagcaacaaacaggcgtgg
cgtttagactcgtacacggggcggatcaactacaattacaaaagcaaatacctgctcacg
ctgacgggccgggtagatggctcaagccggtttggcgataataacaagtacggatttttc
ccctcggtagcgggggcatggcgagtatcggaagaaggattcatgcaggggcagcaggtg
ttgagcgacctgaaactccgggccagttatggcataacgggcaacgccgatattccactc
tacaactctttatcgcgactcaactcggttggaaattacaacttcaataacgtgcgtacc
atcggtattgccgcagccaacatcagcaatcccgacctgaaatgggagaaaagtgcacag
gccgatattggcctggatttcggcttgctcaacaaccggattcaggtaacagccgatgtg
tattacaaaaaaacgaccgatctgctgctgtcgcgtaccattccactctcgtcgggtttc
gggtcggtattcggcaactttggttcggtcgagaaccgtggcatcgaagtaaccgtcaat
gcgggcgtactgaatggtccgctgaagtgggatattaacggcaacatctcggccaatcgc
aacaagctcacgctcatcgacgggacccgtaccgaaatcattcccggtggtggcgatgcc
tctattggtgcttttaccaacaacagcatcctgcgggtaggtgcgcccatcggctcgttc
tatggctatgtgttcgatggcatttaccaaaccggcgacaacatcccgacggggcgtatt
ccgggcaacatccggtatcgtgatctgaatggcgacggggtcatttcgggagcggatcag
accattatcggtaacccgaacccgagctatattttcggaatcaacaacaccctgaagtac
aaaggcttcgacttaagcttattcgtgcagggtgtacagggcaaccagatctttgccgtt
tcgagagtccggctggaagccggggcgggtgccatcaatcagtatgccacctacgtaaac
cgctggacatccaccaatccatcgaaccagtacctgaaagcctcgacggggcagcgggta
aaccagtcggacattcacatcgaagatggttcgtttgtccgcttcaagaacataaccctc
ggttacacgattcctgccgctggcaaactggcctggctggcgaattcgcgggtgtatgtg
agtgccaacaattttgctaccctgaccaactattcgggctatgatccggaggtgaacacc
gcagggcagaacaacctcaacctgggtgtagacaacatcggattccccgtatccaagtcg
ttcattgccggtcttcaactcaacttctaa
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