Spirosoma linguale: Slin_2413
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Entry
Slin_2413 CDS
T01156
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_2413
Transporters [BR:
sli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slin_2413
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
SusD-like
TPR_2
Motif
Other DBs
NCBI-GeneID:
8726157
NCBI-ProteinID:
ADB38433
UniProt:
D2QFQ9
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All DBs
Position
2912415..2913857
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AA seq
480 aa
AA seq
DB search
MKFTRICSFLGLTFLLAQLSACQLTETPYSFVSPQQFYTSASDAEAALTAAYTPVTDLYG
RVGTQLPDYSADQSFPRAVVGRDQLTVFSYDATMDLIGGYWQHCFNGINRANQVLDNVPK
IAMDDTRKKQILAEAYFLRGLYYFHLVKTFGEVPIKQTSTKDIASTEAAKSKVEEVYALI
FKDFEQAIKDLPATPKDRGRAAIGAAQGLLAKAYLYAGNWAKAVENAQAVIQSNRYSLMP
NVLDLYNPLKEDAARTEQIFAAEFSALSGLNSSDLVGFYAPANSPPVFSKAAFGSAFGYM
SFYNSFNPVDKRRQLLDTAYVNSAGKLIGQADVTLKDRVIIKKFLDPNSNGANGENNFPI
LRLADVYLIAAEAEARQNGPTAIAYAAINTVRRRAGIPDLTPGLSKDAFIEAVLQERSWE
LFVEADRWYDLTRTGKFKMVANVLNSYYPSRPVQDKHRFFPIPNVEVLTNSKLEQNPAWK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacccgtatctgttcattcctgggactaacctttttactggcgcagctgagc
gcgtgtcagttaaccgaaacgccctactctttcgtttcaccccaacagttttatacatcg
gcttccgatgccgaagcggccctcacggctgcctatacccccgttaccgatctctatggc
cgggtgggtacacagttgcccgactactccgccgatcagtcgtttccaagggccgtcgtt
ggccgcgatcaactgacggtgttctcctacgatgccacgatggacctgattggcgggtac
tggcagcattgcttcaacgggattaaccgggccaatcaggtactcgacaatgtcccgaag
attgcgatggacgatacccgaaagaagcagattctggctgaagcgtattttctgcgcgga
ctgtactacttccacctcgttaaaacctttggcgaagtcccaatcaagcagactagtacc
aaagatatagcgtcgacggaagccgccaaaagcaaagttgaggaggtgtatgcccttatt
ttcaaggatttcgaacaggcgataaaagacctgcccgctacgccgaaagaccggggccgg
gcggcaatcggggcggctcagggcctgctggcgaaagcgtacctgtatgccggaaactgg
gcgaaagctgtcgaaaacgcccaagccgttattcaatcgaaccgatatagtctaatgccc
aacgtgctggacctatacaatccacttaaagaggacgcagctcggacagagcagattttt
gcggctgaattttcggccctgagtggcttgaatagctctgatctggtgggcttctatgcc
ccggccaactcgccaccggtcttctcgaaagcagccttcggatcagccttcggctatatg
tcgttctacaattcgttcaatccggtcgataaacgtcggcaactgctcgatacggcctac
gtaaattcggccggcaagctgattggtcaggccgatgttacattgaaagaccgggttatt
atcaagaagttcctggaccccaactccaacggagccaacggcgaaaacaacttcccgatt
ctcagactggccgacgtatacctcattgcggccgaggccgaagcgcggcaaaatggcccg
acagccatcgcctatgccgccatcaacaccgttcgtcggcgggcgggcattcccgacctg
acgccgggcctgagcaaggatgcctttatcgaagccgtattgcaggaacgttcgtgggaa
ctgtttgtcgaggccgaccgctggtacgacctcacccgaacgggcaaattcaaaatggta
gccaatgtgctgaactcgtattatccatcgaggccggtccaggacaagcatcgattcttt
cccatcccgaacgtcgaagtgctgaccaactcgaaactggaacaaaatccagcctggaaa
taa
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