Spirosoma linguale: Slin_2705
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Entry
Slin_2705 CDS
T01156
Name
(GenBank) exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sli
Spirosoma linguale
Pathway
sli03030
DNA replication
sli03430
Mismatch repair
sli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Slin_2705
03430 Mismatch repair
Slin_2705
03440 Homologous recombination
Slin_2705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sli03032
]
Slin_2705
03400 DNA repair and recombination proteins [BR:
sli03400
]
Slin_2705
Enzymes [BR:
sli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Slin_2705
DNA replication proteins [BR:
sli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Slin_2705
DNA repair and recombination proteins [BR:
sli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Slin_2705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
8726455
NCBI-ProteinID:
ADB38721
UniProt:
D2QID7
LinkDB
All DBs
Position
3274241..3274858
Genome browser
AA seq
205 aa
AA seq
DB search
MPFLVLDLEMTGPEPDYNEIIQIGAVLFDDNWVERGQYLTNVYPENKDAFSSSSEKIHNL
SLAELEDAPMIYDVLPEMEEWICTQLGLRVPKGQLDRTPYLRDLIICGQSVINDINFLKE
AYRYEKQKWPYSRVLLDLHTLAYFTFRVLKANGRKVPDRLSLTAIASYFGFAREDGFHNA
LEDAVLTAKCLKEVFKLSEQLKIQP
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgccttttttagttcttgacctggagatgaccggccccgagccagactataacgagatt
attcagattggcgccgtcctgttcgatgataattgggtagagcgtggtcagtacctcacc
aacgtttatcccgaaaacaaagacgctttctcatcttcttccgagaaaatccataatctg
tcgctggcagagttggaagatgcgcccatgatttacgacgtgctgcccgaaatggaagag
tggatttgcacccagcttggcctgcgtgtacccaaagggcaactggaccgaaccccttat
ctgcgcgacctgatcatctgcgggcaaagcgttattaacgacatcaactttttgaaggaa
gcttaccgctacgaaaagcaaaagtggccgtattcgcgtgtcttactcgatttacatacg
ctggcctactttaccttccgggtattgaaagcaaacgggcgaaaagtgcccgaccgcctg
agtctgacggccatcgccagttattttggtttcgcccgcgaagacgggttccacaatgcg
ctggaagatgcggtgcttacggcgaagtgcctgaaggaagtatttaagctgagtgagcag
ctgaaaatacagccgtag
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