Spirosoma linguale: Slin_3420
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Entry
Slin_3420 CDS
T01156
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_3420
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_3420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
MetallophosN
TTR_TEN1-4
CooC_C
Motif
Other DBs
NCBI-GeneID:
8727173
NCBI-ProteinID:
ADB39428
UniProt:
D2QPC0
LinkDB
All DBs
Position
4144486..4147716
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AA seq
1076 aa
AA seq
DB search
MAKLLPPKLLSDRLIRVSSTQLLLAALCVSFTYAGKPVNPKFPVNQSVKQADRTLTGRVT
DEKSEGLPGVSVILKGTQRGTVTDADGQYKLDVPDGASTLVFSFVGYLPQEVSVGNQTSI
NVSLKTDSKVLDEIVVIGYGTTRKSDLTGAVTGVKEAQLQERPAPSLNQALSGRMPGVQV
NTNSGRPGGRTTVRIRGFSSINSSNNPLYVVDGVMLPQGTGDQFSNPIDYINPNDIVNVE
VLKDASSTAIYGARGANGVILVQTRKGKAGESRVTYDGQFSVNTIGPNKPKVLNAKEYLA
TEDLAYANMAKYDPVGWAAGKWSYLDPIARRKAFSAAHPGVFDANLNPLYDTDWFKESAQ
NKLSQNHQLGFSGGNERTQYSLSLNYRDDQGLIKTSYMKRYSGRFSIDDQVKSWLKIGGT
MSYNYQTENLVDINDAVARQIVEDFPFLPVRYPDTGVFAENRDYPYAEGTMSSVHRLMDR
KYIQNTQTILGSLFTNITFGKGLEMRTVLGTNVQTQEINQSQTRTLNIGNNGNASTNNNR
QNFWSLENYLTYNKQFGQDHSFTGLLGLSWQETNTFGIGASVSGFATDYFGFNNLGAGAI
NPSVSSGASRFAFNSYFGRINYGYKNKYLFTATGRADGSSKFGENHKFAFFPSAALAWRV
SEEDFLKGNPVISNLKVRTSYGLTGNSEIPPYSSLSLLSSNYATIYNDTKVSGTGINRLA
NPDLRWEKTAQTDVGLEVGFLKGRISLEADYYYRLTTDMLLDAPVPQSSGYATIRRNVGS
MENKGFEFGVNTVNINRGTFSWNTSFNISLNRNKVLSLATPSDIFNVGGPNFTNPTNVIR
VGEAVGSFWGLTRVGVWSEAEREEAAKFTSYRNGLTILPGDIKYLDVNGDKAITDADRSI
IGNGSPKGWGAMTNNIRLGNFDATLELQYMFGNDVMLMNLHPSEDRQALANSYSSVLNAW
TPTNQGSQIAQVRDTRAGYVTNVDSHWIKDGSFLRGRNLLFGYTLPANVTSKLKMNRLRV
YVSAQNFFLLLKDPIVGDPEVTPTNQGTGNSAFSQGMIWHNYPKPTTYLLGLQIGL
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactcttaccacctaaactcctgtccgataggttaattagagtttcaagcact
caactcctactggcagctttgtgtgttagttttacttatgcgggaaagccggttaatcca
aaattccccgtcaatcagtcagtgaagcaggctgaccgtacactcacaggccgggtaaca
gacgaaaagtccgaaggacttcccggcgtgagtgttatcctgaaaggaacccagcgcgga
accgtaaccgatgccgatggacagtataaacttgacgtacccgatggggcctctacactt
gtgttctcctttgttggttacctgccacaggaagttagtgttgggaatcaaacgtcaatc
aacgtcagcctgaaaaccgacagtaaagtactggatgagatcgtagtcatcggctatggt
acgacgcgcaaatccgaccttaccggcgctgtcaccggcgtgaaggaggcccagttgcaa
gagcgccctgcgccttcgttgaaccaggccctgtcaggtcgcatgcccggcgtgcaggtc
aacaccaactcgggacgacccggcggtcggaccaccgtccgtatccggggcttcagctcc
atcaactcctccaacaaccccctctacgtcgttgatggcgtcatgctcccccaaggtacc
ggcgaccagttcagtaacccaatcgattacatcaaccccaacgacatcgtcaacgtggag
gtcctgaaagatgcctcttcgacggctatctacggggctcgtggcgccaacggcgttatt
ctggtacaaactcgtaaagggaaagccggtgaaagccgggtcacctacgacggtcagttc
agcgttaacaccatcggacccaacaagccaaaggtgctcaacgccaaggagtacctggct
accgaagacctcgcctatgccaacatggccaagtatgaccccgttggctgggccgcgggt
aagtggtcttacctggacccgatagcccggcgcaaagccttcagcgcggctcaccctggt
gtgtttgatgccaacctgaacccactctacgacaccgactggttcaaggagtcggctcag
aacaagctttcccagaaccaccagttaggtttcagtggcggtaacgagcgcacccagtac
tccctctcgctgaactaccgcgacgatcagggtctgatcaagacctcctacatgaagcgt
tactcgggtcgtttctcgatcgatgatcaggtcaagagctggcttaagattggcgggaca
atgagctacaactaccagacggaaaacctggtggacatcaacgatgcggtggcccgtcag
atcgtcgaagacttccccttcctgcccgtacgctacccggacaccggcgtcttcgccgag
aaccgggactacccttatgcagaaggcaccatgagttcggtacaccgcctgatggaccgt
aagtacatccagaacacccagactattctgggcagtttgtttaccaacatcactttcggc
aaagggctggagatgcgtacagtactgggtaccaacgtccagacgcaggagattaaccag
tcgcaaacccgtacgcttaacattggcaataacggtaacgcatcgaccaacaacaaccgg
cagaatttctggtcgttggagaactacctgacctacaacaaacagtttggtcaggatcac
tccttcaccggactactaggtctgtcgtggcaggagactaacacctttggcatcggtgcc
agcgtaagcggttttgccaccgactacttcggctttaacaacctgggcgctggtgcgatc
aacccatcggtgagttcgggtgcttcacggtttgcctttaactcctacttcggtcggatc
aactacggctacaagaacaagtacctcttcaccgctaccggccgggctgatggctcctcg
aagttcggagaaaaccacaagtttgccttcttcccctcggcggctctggcctggcgggta
tcggaagaagacttcctgaaaggcaaccccgttatctcgaatttgaaagtgcgcaccagc
tacggtctgacgggtaactccgagattccgccttactcctcgctctcgctgttgagttca
aactacgctacgatctataatgatacgaaggtgagtggcacgggtatcaaccgtctggct
aaccccgacctgcgctgggaaaaaaccgctcagactgatgtaggtctggaagttggcttc
ctcaaaggacgcatctcgctggaagccgattactactaccgtctgacaaccgacatgctc
ctggatgcccccgtaccacaatcgagcggctatgccaccattcggcgtaacgtaggctcg
atggagaacaaaggttttgagttcggagtgaacacggttaacatcaaccggggtactttc
agttggaacacctccttcaacatctcccttaaccgcaacaaagtcctctccctggctact
ccgtctgacatcttcaacgtaggtggtcctaacttcactaaccccaccaatgtcatccgg
gtaggtgaagcagtaggttcgttctggggtctgacccgggtaggcgtatggagtgaagcg
gagcgggaagaagcggccaagtttaccagctaccgcaacggtctgaccattctgcccggc
gacatcaagtacctcgacgtaaacggcgacaaggccatcaccgatgctgaccgcagcatc
attggcaacggtagtcctaaaggctggggtgccatgaccaacaacattcgtctgggcaac
ttcgatgccaccctggaacttcagtacatgtttggtaacgacgtcatgctgatgaactta
caccccagtgaagaccggcaggctctggccaacagctactcgtcggtgctcaacgcctgg
acgccaaccaatcagggtagccagattgctcaggtacgcgacacacgggcgggctacgta
accaacgtcgacagtcactggattaaggacggttcgttcctgcggggccgcaacctcctg
tttggctatacgctgccggctaacgtaacgtctaaattaaagatgaaccggttacgggta
tacgtttccgctcagaacttcttcctgttgctgaaagatcctattgttggtgatccggaa
gtaacgcccaccaaccagggaacaggcaacagcgccttctcacagggcatgatctggcac
aactaccctaaaccaactacctatctccttggtctgcaaattggcttgtag
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