Spirosoma linguale: Slin_3671
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Entry
Slin_3671 CDS
T01156
Name
(GenBank) sigma 54 interacting domain-containing protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sli03000
]
Slin_3671
Transcription factors [BR:
sli03000
]
Prokaryotic type
Helix-turn-helix
Other families
Slin_3671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA
AAA_2
Mg_chelatase
AAA_16
HTH_8
PDE8A_N
cREC_REC
AAA_3
AAA_19
Motif
Other DBs
NCBI-GeneID:
8727424
NCBI-ProteinID:
ADB39677
UniProt:
D2QRC3
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Position
4431301..4433274
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AA seq
657 aa
AA seq
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MSTRILIVEDEFVVANSLRILLRQAGYHVSGIATSAEEAYAILQKDKPHLVLLDIRLNGS
ESGIDLARKLKAEHIAFVYLSANSSQKVLEEAKKTEPYGFLVKPFREKDLLVALDIALYL
HKNRLESKLRQEALLERQLLEISQNALNAKQTFLQIARAIRTVIPFDLIVCGTRPFTASR
FGDYGYLRVGLDDYQFIGRDELLTISGLKSDALSNIIENSHTDTHVATYNNNATTDVVHL
TPLQKLWLTIYNLESYLVFPVALSDGSWVHYTFYSRRREMYTQSHLAMLTGFISSLTKAT
EKLVQSDLSSTYTTRLSVDRKHDRAQDSQGSVPKFKGIIGNHPLLLAALDLVTQVAPYNT
SVLILGESGTGKESIAQAIHSLSVRKTGPFIKVNCAAIPAALIESELFGHEKGAFTGAIE
KRKGKFEQSHEGTLFLDEIGEMPLDMQVRLLRVLQEKEIDPVGGKSPKKVDVRVVAATNR
NLEREVAEGRFRLDLYYRLNVFPITLPPLRERKSDIQALSVYVANRFCKEFSKDFNGISA
GMMDELEGYTWPGNIRELENVLERSVILNDGQSELELKQSLLGTTDKVPSKVAIETLGDV
RRIQRETEREYLISVLKNTKGLIRGANGAAELLHIKPTTLEARLAKLGIQREDLGIG
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaggatactgattgttgaggatgagtttgtggtagccaattcgctccgtatc
ctgttaaggcaggctggctaccatgtgagtggtatcgccacttcggctgaggaagcgtat
gccattttacaaaaggataaaccccaccttgtgctgctagatatccgattgaatggaagc
gagtcgggcattgatctggcccgaaagctaaaagcggaacatattgcctttgtttattta
tccgccaattcaagtcaaaaagtactggaagaagcgaaaaaaaccgaaccctacggcttt
ctcgtcaagccattcagggagaaagatctgctggtggccctggatattgccctgtatctc
cataagaacaggctcgagtcaaagttgcggcaggaagcccttctggaaagacaactattg
gaaattagccagaatgccttgaacgccaagcagacgtttttacagattgcacgggctatt
cgaacggttattccctttgatctcatagtatgtggaaccagaccatttacggcttcccgg
tttggtgattacggctatttacgcgtcggacttgatgactatcagttcatcggtagggat
gagctactgaccatttcgggtttaaaaagtgacgccttatccaatatcattgaaaacagt
catacggatacccatgtagccacttataataacaatgcaacgaccgatgttgtccacctt
actccgttgcaaaagctctggttaaccatttacaatttagaatcatatctggtatttccc
gtcgctcttagcgatggatcatgggttcactacactttttatagtcgtcggcgggaaatg
tatacgcaaagccacttagccatgctaaccggttttataagcagtttgactaaggctact
gaaaaattagttcagtccgacctatcttccacatacacgacacgactatcggttgataga
aagcatgatcgcgcccaagatagtcaaggctctgttccgaaattcaaaggcattatcggg
aatcatccgcttttactggccgccttagaccttgtaacgcaggtggcaccttataataca
tccgtgcttatacttggggaaagcggtactggaaaagaaagcatcgcacaggccattcac
tccctctctgtacggaaaaccgggccgttcatcaaagtaaattgtgcggctattccggcg
gcactgatcgaatctgagctgtttggccatgagaaaggcgcatttaccggcgccattgaa
aagaggaaaggaaaatttgagcagtctcatgaaggaacgctgtttttagacgagattggc
gaaatgccattggacatgcaagtgcggctgttgcgggttttacaggaaaaggaaattgac
ccagtaggcggcaaatcgcccaagaaagtcgatgttcgtgttgtagccgctacgaaccga
aatctggaacgtgaagtggctgaaggccggttcaggcttgatctgtattatcgcctaaac
gtttttccaataaccttaccaccccttcgcgaacgaaaaagtgatatacaggcactatca
gtttatgttgccaaccggttttgtaaagagttcagcaaggatttcaacggcatctcggca
ggcatgatggatgaattagaggggtatacctggccgggaaatattcgtgaactcgagaac
gtgctggagcggtcggtgatcctgaatgatggtcaatctgaactggaattaaagcaaagc
ctcttgggcacaactgacaaggtacccagcaaggtagcgatcgaaacccttggggatgtt
aggcgcattcagcgagagacagaaagggagtatcttatttctgttctcaaaaacacgaaa
ggcctcatccggggggccaatggggccgccgaattactacatataaagccgacaaccctg
gaagccagactcgctaagttgggcattcagcgagaggatttaggcatcggatag
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