Spirosoma linguale: Slin_3827
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Entry
Slin_3827 CDS
T01156
Name
(GenBank) conserved hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sli03016
]
Slin_3827
Enzymes [BR:
sli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Slin_3827
Transfer RNA biogenesis [BR:
sli03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Slin_3827
Prokaryotic type
Slin_3827
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
HNH_repeat
Motif
Other DBs
NCBI-GeneID:
8727585
NCBI-ProteinID:
ADB39817
UniProt:
D2QHL8
LinkDB
All DBs
Position
complement(4596831..4597709)
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AA seq
292 aa
AA seq
DB search
MILTITGYSTALFSTWYFVEELRLLLDAGDGIAPTLLQKSRKIDHIFLSHADRDHVTGLL
RLNELNARDGFPAVYYPTDAGSISALETFSKQFDERVKKTVWHPLGDQQQVQLRKDLFVQ
SARNNHVVKAQLHEVKSLGYQIYQTKNKLKSDFVDLSGEALRQLAETLGRESLTDEVRTN
LLAYSGDTPAENFDQWNNTQILIHEATFLTRAELATLETNRNQHSTLEEVLAAVADLNIQ
TLILGHFSSRYSEEEIDEAIRRFCTAFHVTIPVHRLLPGQTHWDILRSDPIN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgatactgacgataactggttattcaactgccctattttcaacctggtatttcgttgaa
gagctacgactattactcgacgcgggcgatggcatagccccgacactcttacagaaatct
cgcaagattgatcatattttcttatcgcatgctgaccgcgaccatgtaacaggactgttg
cgcttgaatgagctaaatgcccgcgacggctttcctgccgtttattatccaaccgatgcg
gggtctatttcagcgctggaaaccttttcaaaacaatttgatgagcgagtcaagaaaacg
gtttggcatcctcttggtgatcagcaacaggttcagcttcgtaaagacttatttgtgcaa
tcggcccgcaacaatcacgttgtcaaagcacaactgcatgaagtaaaaagtttgggttat
cagatttaccaaacaaaaaataagctcaaatcagatttcgtcgacctatcaggggaagca
ttgcggcagttagcggagactcttgggcgggaaagtctgacggatgaagtcaggacaaac
ttactagcttattccggcgacacaccagccgagaactttgatcagtggaataacacgcag
atcttgattcacgaagcgaccttcctgacccgtgccgaattggctaccttagaaacgaac
cggaatcaacacagcacacttgaagaagttttggcagcggtggctgatctgaacattcaa
acgctgattctaggtcatttctcgtcgcggtattctgaggaagaaatagacgaggccatt
cgtcgtttctgcaccgcctttcacgtcacgattccggttcatcgtctgctaccaggtcaa
acgcactgggatattttgcgaagcgatccgattaactaa
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