Spirosoma linguale: Slin_3903
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Entry
Slin_3903 CDS
T01156
Name
(GenBank) intradiol ring-cleavage dioxygenase
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
sli
Spirosoma linguale
Pathway
sli00362
Benzoate degradation
sli01100
Metabolic pathways
sli01120
Microbial metabolism in diverse environments
sli01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Slin_3903
00624 Polycyclic aromatic hydrocarbon degradation
Slin_3903
Enzymes [BR:
sli01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Slin_3903
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Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
DUF3471
DUF4198
DLH
SdrD_B
Motif
Other DBs
NCBI-GeneID:
8727661
NCBI-ProteinID:
ADB39893
UniProt:
D2QHU4
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Position
4681716..4682699
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AA seq
327 aa
AA seq
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MEKQPNIPRRSWLRLSVGLAAGTVGTAFTLTDADKDRCAVTPRQELGPFPTMQFRSQADH
DVDLTQLTGQAGIATGEVIIVKGQILDTSCQPIAGAIVEIWQANHHGKYRHEYGDSGQSD
PNFQGWAQAVTNANGEYQFKTILPGLYGHRARHIHYKVAKRGYHELVTQLYFDGEDRNRT
DEILNSFTHEEQMRLTGKLDKTTPTPTIEFTINLDKVQVGALPAKVLADYTGEYVLQAKG
TDYEQLLNTFLGGPYDKVTMQVEQQDGLLYLTTTKAPKAELFWKAKDQFDAASFYDTVLT
FGRNAAGKVVSATFRARDGQELHGTRV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaaccaaacatcccccgtcgaagctggctccgcttgagcgttggcctggct
gccggtacggtcggcacggcgtttacgctgaccgatgccgacaaagaccgttgcgccgtt
acgccccgtcaggaacttgggccattcccaaccatgcagttccgttcgcaggcagaccat
gacgttgatctcacgcagctgaccggacaggcaggcatcgctacgggtgaggtcatcatc
gtgaagggtcagatactcgacaccagttgccagcctattgccggggctattgttgagatt
tggcaggctaatcaccacggcaaataccgccacgagtatggcgactccggccagtcggac
cctaactttcagggctgggcgcaggcggttaccaatgcaaacggagaataccagttcaaa
acgatattgccgggattgtatggtcatcgggcgcggcatattcactataaagtggccaaa
cgcggctaccacgaactggttacgcaactttacttcgatggcgaggaccgcaacaggacc
gacgagattctgaactcgtttacccacgaagaacaaatgcggctgacgggtaaactagac
aaaactaccccaacgccaaccatcgagttcacgatcaacctcgacaaggtgcaggtgggc
gcactgcccgcgaaggtcctggccgactacacgggcgagtatgtattgcaggcgaaaggc
accgactacgaacagcttctaaatacgtttctgggcggaccctacgacaaggttaccatg
caggtggagcaacaggatggtctgctttatctgactaccaccaaggctcctaaagccgaa
ctgttctggaaagccaaagatcagttcgatgcggcttcattctacgacacggtgctgacg
tttggccgcaatgccgccggtaaggtagtgtcggccacgtttcgggcgcgggatggacaa
gagttgcacggcacacgagtgtag
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