Spirosoma linguale: Slin_4008
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Entry
Slin_4008 CDS
T01156
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sli03000
]
Slin_4008
Transcription factors [BR:
sli03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Slin_4008
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_IclR
HTH_31
HTH_Tnp_ISL3
HTH_24
MarR_2
MarR
HTH_23
HTH_26
HTH_38
HTH_5
HTH_11
HTH_Tnp_4
HTH_28
HTH_3
HTH_10
HTH_7
Motif
Other DBs
NCBI-GeneID:
8727766
NCBI-ProteinID:
ADB39998
UniProt:
D2QIS2
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Position
4819513..4820535
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AA seq
340 aa
AA seq
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MKRHQVTIIDIARQLNLSKSTVSRALTGHASVKEDTRQAVLTLAKALDYQRNMLAINLSS
SQSRTIGIIVPEFVTSFFPVVIMGAQEIADQAGYTVLICQSNESYETEVANARTMIANRV
DGVLVSLTRETRNFDHLAVFQRKAVPMVFFNRICYDIDVPKVVVDDYEGAFKATEHLIQT
GKRRIAHLAGPMSLYISRKRLEGYKDALRKHNLPIDDDLIISYDLNLERAKIYVNYLLDL
PEPPDALFAVNDPTALEALKIIKARGLSIPDQIAVVGFSNDYGSSLIEPGLTTIAQPTRD
IGRIAAQLLLEQINSETTTWKPVTRVLKTELIVRGSSVKP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcatcaggtcaccattattgacattgcccgtcaattgaacctgtccaagtca
actgtttcgcgagccctgaccggtcatgcatcagtgaaagaggatacccggcaggcggtg
ctaacgctcgccaaagcgctggactaccagcgaaatatgctggctatcaacctgtcgtcg
agccagagccgaacaattggcattattgtaccggagttcgtgacgtcatttttcccggtt
gtcattatgggagcgcaggagatagccgatcaggccggatacactgtcctgatctgccag
tcgaatgagagttacgaaacagaagtagccaatgcacggacaatgatcgcgaatcgggtg
gatggcgtactggtgtcgctgacgcgtgaaacaaggaatttcgaccacctcgccgtattt
cagcggaaagcggttcccatggtttttttcaaccggatctgttatgatatcgacgtaccc
aaagttgttgtcgatgattatgaaggggcttttaaagcaacggaacacctgatccagacg
ggcaaacggcgtattgctcatctggccggtccgatgtcgctttacatcagccgaaaaaga
ctggaggggtataaagatgcattacggaaacataaccttccgattgacgacgacctgatt
atcagctacgatctaaacctggagcgggccaagatctacgtaaactacctgctcgatcta
cccgaaccgccagacgccctgtttgcggtcaatgatccaaccgcgctcgaagccctgaaa
atcatcaaagcccgggggctttcaatacccgatcagatagccgtagttgggttcagtaac
gattatggttcatcgttgatcgaaccagggctaacaaccattgcccagcccacacgggat
attggtcggatagccgctcagttgctgctggaacaaattaactcagaaacaactacctgg
aaaccggtaacccgagtcctaaaaacggaactcattgtacggggctccagcgtaaaaccc
tga
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