Spirosoma linguale: Slin_4178
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Entry
Slin_4178 CDS
T01156
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sli
Spirosoma linguale
Pathway
sli00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Slin_4178
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sli01007
]
Slin_4178
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sli03016
]
Slin_4178
03029 Mitochondrial biogenesis [BR:
sli03029
]
Slin_4178
Enzymes [BR:
sli01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Slin_4178
Amino acid related enzymes [BR:
sli01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Slin_4178
Transfer RNA biogenesis [BR:
sli03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Slin_4178
Prokaryotic type
Other AARSs
Slin_4178
Mitochondrial biogenesis [BR:
sli03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Slin_4178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
8727937
NCBI-ProteinID:
ADB40164
UniProt:
D2QKJ8
LinkDB
All DBs
Position
5029160..5030929
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AA seq
589 aa
AA seq
DB search
MLRTHTCGELRLADHNTTATLCGWVQTIRDKGGVLWIDLRDRYGITQLLLEDGQTAPELF
TTARSLGREFVVKATGTVIERKSKNPNIPTGDIELKVTSLEVLNPAKLPPFLIEDETDGG
DDLRMKYRYLDLRRNPVRKSLELRHRMAQQTRVYMDGQDFIEVETPVLIKSTPEGARDFV
VPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDCEMS
FVEQEDILNMFEGLVRHLFKTVKGIDMASVPRMTYADAMKFYGSDKPDTRFGMEFVELKG
TFDTVDMTSGKGFGVFDSAELVVGINAPGCAHYTRKQLDELTDWIKRPQIGAKGLIYVRY
NEDGTLKSSVDKFYSETELKAWAAHFGAKPGDLMLIVSGDCAKARKQLSELRLEMGSRLG
LRDPNVFSTLWVLDFPLLEFGEEENRWFAMHHPFTSPKPEDIPLLDTDLGAVRANAYDLV
INGTEVGGGSIRIFNRDLQARMFSILGFSDEEAKAQFGFLMDAFEFGAPPHGGIAFGFDR
LCSLFGGADSIRDFIAFPKNNSGRDVMIDSPSAISQAQLNELKIATIAK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggacgcacacctgcggagaactccgccttgccgaccacaacaccacagccact
ctttgcggctgggttcaaaccatccgcgataaaggcggtgttctatggattgacctacgt
gaccgctacggtattacccagcttttactcgaagacggccaaaccgcccctgaactgttc
acgacagcccggtccctcggccgcgaatttgtggtgaaagccacgggaacggttatcgaa
cggaaatcgaaaaacccgaatatccccaccggcgacattgaactgaaagtaacctcgctg
gaggtgctgaaccccgccaaactgccgcctttcctcatcgaagacgaaaccgacggtggc
gatgacctccgcatgaagtaccggtatctggacttacgccggaatcccgttcgcaagagc
ctcgaactgcgccaccgcatggcccagcaaacgcgggtgtacatggatgggcaggacttc
attgaagtggaaacgccggttctgattaaatcgacgcccgaaggcgcacgggattttgtg
gtgcccagccgcatgaaccccggcgaattttatgccttgccccagtcgccccaaacgttt
aagcagttgctgatggtatcgggttttgaccggtattaccagattgtcaaatgcttccgg
gacgaagaccttcgcgccgaccgccagccggagttcacccaaatcgactgcgaaatgtcg
tttgtggagcaggaagatattctgaacatgtttgaagggctggttcgccacctcttcaag
accgttaagggcatcgatatggcctcggttccccgcatgacctatgccgacgcgatgaag
ttttacggctccgacaagcccgacacgcgtttcggcatggagttcgttgaactgaaaggc
accttcgacaccgtcgacatgacctcgggcaaaggcttcggcgtatttgactcggccgaa
ctggtcgtgggcatcaacgcaccgggctgcgcacactatacccgcaagcagctcgatgaa
ctcaccgactggatcaaacgcccgcaaatcggtgccaaaggccttatctatgttcgctac
aacgaagatggcaccctgaagtcgtccgtcgacaagttctattccgagactgaactgaaa
gcctgggccgctcatttcggtgctaaacccggcgacctgatgctgatcgtttcgggcgat
tgtgccaaagcccggaaacaactgagtgaactacgcctggagatgggcagccggttgggt
ctccgcgatccgaacgtgttcagtacgctatgggtactcgacttcccgctgctggagttt
ggcgaagaagaaaatcgctggttcgccatgcaccacccgttcacatcgcccaaaccggaa
gacattccgttgctggataccgatctgggtgccgttcgggccaacgcctatgacctggtc
attaacggaaccgaagtaggtggtggctccatccggatattcaaccgcgatttgcaagcc
cgcatgttcagcattcttggtttctcggacgaagaagcaaaagcacaattcggcttcctg
atggatgcgttcgagtttggtgctcctccgcacggcggtattgcctttggtttcgaccgc
ttgtgttcgctcttcggcggggccgactccatccgcgactttatcgctttcccgaaaaac
aactccggccgcgatgtcatgatcgattcgccctctgctatttcacaagcgcagttgaac
gaactgaaaattgcaacgatagcgaagtaa
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