Spirosoma linguale: Slin_4181
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Entry
Slin_4181 CDS
T01156
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_4181
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_4181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
Ig_2
Ig-like_POM152
CARDB
PKD_3
Motif
Other DBs
NCBI-GeneID:
8727940
NCBI-ProteinID:
ADB40167
UniProt:
D2QKK1
LinkDB
All DBs
Position
5035888..5041140
Genome browser
AA seq
1750 aa
AA seq
DB search
MSFLSCCRLTAGLVLLLQPLLVFPQNQPRSTPQDTIRLLAEEEQRRLMDPATGTVPYERL
DAARQQLNNRAVTANGGPVAQSGIPNITWQERGPSNLGGRTRALLFDPNDPTRKKVWAGS
MSGGLWYTNDITDTNAGWTPVSDTWENMVVTALAADPSNPQVMYAGTGDMFNYVTGGGIW
KTTNGGTTWTRLSNTIPGGNPPALSYSFGYIQRIVINSSGQVFAATRIGVVRSADGGTTW
QYALAPNQGIGLTGSTGNYNNDLATDLELGTDGILYAGFNPNRLFRSTNTAGTSWTEITP
AGASGGERTELALAPSTSGTNQVIYAVLRAYNGSSYYQDIKWFKKSSNAGVTWTDVQIPV
FSWGDHFTSSNGYYSMNLVVHPTDANTLYAGGYNWFRSVDGGNSWSVPLTNTYTRYQALL
FQPGSTLSAAFCSDIGISWSSNWNDVSQTQPTILDKNNGYRVNETNSVAMKSSPGSAYLL
GTSRSGAFKLTANGLSAGSIFYTYSSDMGPAFIDEETPGSQLFTTSGGSVLSYDGSNYQF
ITGLTSVGGVADYDSPLNTLYIADYNYTTSQYFLRKVTGIGSSITTALVPLTGMTNSLSY
LKLSKDRTALFAGSYPNKLYKITNLDQASPTVMAIDNGAFPQYTTVACIDIGATDNELLV
TLSNFGVQSVWYTNDGGQSWVGKDQSNYGLPDVPVRAALFNPQNRKQVLLGTDAGIWSTT
DITATNPGWAFSSTGMGTFRVNQLKYRSSDGRVAAAIYGRGIWTTDAFATPYTAPTIAIT
SISNSTLCAGNTFSVAFSTAGPAFNSGNTFEVWLSDAMGNFTNAQKIGSGTSSPITATLP
SGYNAVPYGTSYQVKIMSTNPDIESSPSGILAIGNLRSAETLDRLAGLSTYFSSYGIICP
GSRATLKTYAYSTNYSRIEPTSYQWLVGSSPISGATSATISVQQAGTYSAVVKQAGCTVT
SYSYILAVSTNPYNDLLSDSYWEPQCDDHPLKLTSIYPGETAQFQWSRDGVDIAGATSYT
YNASQTGSYSYRFTDGSCAVTSSKEYVQFGRALSAPIYLSWNSDSLLCSSATNYNAAIYT
NIPPANDYTVQWYRDGTIISGATSRSYYPYQPGVYSMLLKQGSCQTRSNAIVISQSDQIK
ASIIYSYPSKAACPGETRYLYAFPSNDGSFQWQKDGVDIAGATSSSYPASVSGKYTVRIT
KGSCSATSDPVSLTFSTTIQPVITIAESNMGESCTGANPYVSDSYNQSGYQYQWYRNGTL
LNGTTNSGFYTTQSGVYSVRVTNGSCTGLSKDVYLSIGNGSVAKPKITITPMTRQLCLNN
SLFLFVRAYSGNLQWKRNGVNIPQATSYGYDATQSGIYSVVLQDGSCSAESDPVEVKIGE
VTTATLSGNALITSGQSAKLPVSFSGPAPWSVTLTNGQSVTATYQNPTLISVSPTSNTTY
QLASVINACGTGTTSGQASVSVGIGSADVSLNMAASNRSPKVGDVVNYTLSATNAGPDNA
EGIQLSSLLPAGLAFVGSASPGVSAANGVISANLGTIPANSQSAISFLATPTLPGTFATT
AQITSSLTPDPDSQPNSGTGDGQDDAVRVDLRTTSEGGLVSSPNPNQTPLPVVAPNQPAT
GPNTADLSLAMRVDKLTPTSSNLISTSLTVSNGGGSSASSIVVQVVLPNGVALPASQSGW
VQVDGQTFKGYINQLASGQSATLVLNWQATGSGTLKAQILDMNEADPDSTPGNGFSKGED
DEAAISLRLR
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttcttagctgctgtaggctaacagctggtctggtgttgcttctgcaacccttg
ctggttttcccacaaaatcaacccagatccactccgcaggacacaatacgccttttggct
gaagaagaacagcgacggctgatggaccccgccaccggcacggtcccctacgaacgactc
gatgcagcacggcagcaactaaacaaccgggcagtaactgcaaacggtggtccggttgcg
cagagtggcatccccaacatcacctggcaggagcgcggccccagcaacctgggtggtcgt
acccgcgctctactattcgaccccaacgacccgacgcgtaagaaagtctgggccggtagt
atgtccggaggcctttggtacacaaacgacattactgacacgaacgcaggctggacgccc
gtgagtgatacctgggaaaacatggtcgtgacagcccttgccgccgatccatcgaaccca
caggtcatgtatgcaggcacgggagacatgttcaattatgtaacggggggcggaatctgg
aaaacgaccaatggcggtacaacatggacacgactcagcaacaccattccgggtggcaat
ccacccgcgctcagctacagttttggctacattcagcgtattgtaatcaacagcagtggc
caggtgtttgcggctacacgaattggcgtagttcgctcggctgacgggggaactacctgg
cagtatgcactggctcccaaccagggcatcggcctaacggggtcaacaggcaactacaac
aacgatctggctaccgatcttgaattgggcaccgatggcatcctatacgctggttttaac
ccaaaccggctttttagatcgacgaacacagcaggcacatcatggactgaaatcaccccg
gcaggcgcatcaggtggcgaacgtactgagttagcactagccccctcaaccagcggtacc
aatcaggtgatctatgccgtattacgagcctataacggcagtagttattaccaggacatc
aaatggttcaagaaaagcagcaatgcgggtgttacctggacggatgtgcaaattcccgta
tttagctggggggatcattttacgagcagcaatgggtattattcaatgaaccttgttgtc
catccaacggatgccaataccctgtatgccggtggttataactggttccgctccgttgac
ggcggcaacagttggagcgttccacttacgaacacgtataccaggtatcaggcattattg
ttccagccgggtagtacgctatcagcagcattttgtagtgatataggcatttcctggtcg
tcgaactggaatgatgtaagccagacacagccaacgattctggataaaaacaatggatat
agggtaaatgaaaccaattcagttgccatgaagtccagtcccggcagtgcctacttactg
ggaaccagccggagtggtgcatttaaattaacggccaatggcctatcggcaggctctatt
ttttatacttattcttctgacatgggaccggccttcattgacgaagaaacccccggcagc
cagttatttacaacaagcggaggcagtgttctatcgtacgatggcagcaattatcaattc
ataaccggacttacctcagttggtggagtagccgactacgatagtcctttgaacacactt
tacatcgctgattacaattatactaccagtcaatatttccttcgcaaagtaacaggtata
ggttcgtctatcacgactgcgctggtcccgttgaccgggatgacaaactcattatcctac
cttaaattaagtaaagaccggacggccttatttgcaggtagttacccaaacaaactatac
aagattaccaatcttgatcaggccagccctacggttatggctatcgacaatggggccttt
cctcaatacactacggttgcgtgcatcgatattggggcaactgataatgaactgctggtc
acgctctccaacttcggtgttcagtcggtttggtatacgaatgatggcgggcaaagctgg
gtgggtaaagatcaatcgaactacggccttcccgatgtacccgtccgagcggccctgttc
aatccccagaatcgtaaacaggtacttttaggaaccgatgccggtatctggtcgacaacc
gacatcacggctaccaatcctggctgggcattttccagtacgggtatgggtacgtttcgg
gtaaatcagcttaaatatagatcatccgacggacgtgtagccgcagccatctatgggcgt
ggcatctggacgaccgatgcctttgctacaccatatacggcccctacaatagctataacg
tctatttccaattcgacgctctgtgcgggcaataccttcagtgtggcgtttagtacagcc
gggcccgcctttaattcgggaaatacatttgaggtctggctatcggatgcgatggggaac
tttacaaacgcccaaaaaattggcagtggcaccagcagtccgataacagcaaccctgcca
agtgggtataacgccgttccctatggcacaagttatcaggtaaaaatcatgtcaaccaac
cctgatatagaaagtagcccaagcggaattttggcgattggaaacctgagaagcgccgaa
actcttgaccggctggctggcctatccacgtatttttccagctatggcattatttgtccg
ggaagtcgtgccacactcaaaacgtatgcctattcaaccaattattcaaggatagaacca
accagctatcaatggttagttggcagttctcccataagtggtgcaacatcagctacgatt
tcggttcagcaggcgggtacctacagtgctgttgtcaaacaggcaggctgtaccgtaacg
agttattcgtacatacttgccgtatctacaaacccttataatgacctactatctgactct
tattgggaaccacaatgtgatgaccatccgttaaaattgacatccatttatcccggcgaa
acggctcaatttcaatggagccgtgatggcgtagatatagccggagctaccagttatacc
tataacgcttcgcaaacgggtagctattcataccggttcacagatggtagttgtgccgta
acaagcagcaaggagtatgtacagtttggacgtgcgctctcagcccccatttatttatca
tggaatagtgattccctactttgctcatcagcgaccaattataatgccgctatctataca
aatatccctccagcaaacgattacaccgttcaatggtatcgcgatggaactatcatttcg
ggagctacctccaggtcttattatccgtatcagccgggggtgtattctatgttgctgaag
cagggaagttgtcaaacacgcagcaacgctattgttattagtcaatcggaccagatcaag
gccagcattatctattcgtaccctagtaaggcagcctgccccggcgagactcgctatctg
tacgcttttccatctaacgatggcagtttccagtggcaaaaagacggtgtggatatagcg
ggagcaacgtcttcaagttatccggcgagtgtatcaggtaagtatacagtacggataaca
aaaggaagttgttccgctacctccgaccctgtatctcttacattttcaactaccattcag
cccgtaattacgattgccgagtccaatatgggtgaatcatgcactggggctaacccctat
gttagtgattcatacaatcagagtggctatcaatatcaatggtatcgaaatggtactctc
ttaaatggaacaacaaactcaggattctatacaactcaatcaggcgtttattcagtacgg
gtaacaaacggcagttgtacaggtttgtcgaaagatgtgtatctctcaatcggtaacggc
tccgtggcaaagcccaaaattactattacccccatgacccgccagttgtgtttaaataat
tcgttgtttttattcgtacgtgcgtatagcggcaatctacaatggaaacgtaacggagtc
aatattccccaggctacctcctatggctatgatgccacccagtcaggcatctattcagtt
gttcttcaggatggctcctgctcggctgagtccgaccctgtggaagttaaaatcggcgaa
gtcaccaccgctacgctgtccggtaatgccctcattacatccgggcagtcagccaaacta
cccgtttccttttccgggccagccccctggtcggttacccttactaacggccagtcggtt
acggcgacttaccagaacccaaccctgattagtgtttcacctaccagcaacaccacctac
caactcgcgtcggtcatcaatgcctgtggcaccggcaccacctccggtcaggccagcgtt
tcggtcggtataggctcggccgacgtctcgctcaacatggccgccagcaaccgttcgccc
aaggtgggcgatgtagtcaactatacacttagtgccaccaatgccggacccgacaacgcc
gagggcatccaactcagcagcttgctccccgctggacttgcctttgtgggcagtgcctcc
cccggtgtgagtgccgccaacggcgtcatcagtgccaatctgggaaccatccccgccaac
agccaaagcgctatcagcttcctggcaacgcctactttgcccggcacctttgctaccacc
gctcagattacgtccagtctaacccccgaccccgacagccagcccaactcgggcaccggc
gacgggcaggatgatgccgttcgtgtcgatttacgtactacaagtgaggggggtctggtc
agctcgcctaaccccaaccagacaccactgcccgttgtagcccccaaccaacccgccacc
ggccctaacaccgccgacttaagtctggccatgagggtcgataaacttaccccaacctcg
tcgaacctcatcagcaccagcctgacggtcagcaacggtggtgggtcatcggcttcgtcg
attgtggtacaggtggtgttgcccaacggggtggctctgccagccagtcaatcgggttgg
gtgcaggtagatgggcagacttttaaggggtatatcaatcaactggcttcgggtcagtcg
gctacgctcgtgctcaactggcaagccacgggtagcggcacgctgaaggcccagattctg
gacatgaatgaagcagaccccgattcaacaccaggcaatgggttttctaaaggggaggat
gatgaagcggccattagtctacgcctgaggtaa
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integrated database retrieval system
