Spirosoma linguale: Slin_4221
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Entry
Slin_4221 CDS
T01156
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_4221
Transporters [BR:
sli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slin_4221
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-GeneID:
8727980
NCBI-ProteinID:
ADB40206
UniProt:
D2QKP0
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All DBs
Position
complement(5083273..5084646)
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AA seq
457 aa
AA seq
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MIRFLRYSLLITLVSLGACQEVLEPKPVTLLVDELVLNEPNDVQPVRIGLYSAFRGMASP
NIIAGDFTADYIQANGTFTDNIEFGTKRITATNGAVDALWGSIYNTIYVANFILERLPSV
PNVTEATRKQVTAEARFLRGWANFIGAYTFGDIPKVTSTNQVANTTITRSAKADILASVL
ADYQAALTDLPNVTSASTNATTNAAYINKINCQAAMARFYLYQKNWTQAEQLATVVISSG
VYSLQTNYSDVVTKDFTNESIIEVGYNLTDDPGTGAYSLNNLLVGRREVIPSNQLVSSLL
SVESGTRSATITFNAQQQRGNDNGWTVRKYGTASEDNNNIVLIRLAEMYLIRAEARAQQG
KLTGASGAIADLNVLRTRAKAPAITAAAQADVLLAVERERVYELAFEGHRWYDLVRTGRA
QAVMSAFSPNWNSRFELWPIPQREIQQNTALTQNPGY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgattcgctttctacgatatagcctattgattacactggtgagcctgggggcctgtcag
gaggtactcgaacccaaaccggttaccctgctcgtcgatgaactggtgctgaacgaaccc
aatgacgtgcagccagtacggattggtttgtacagtgcgtttcggggcatggcgtctccc
aacatcatagccggggactttactgccgattacatccaggcaaacgggacctttaccgat
aatatcgagttcggtaccaaacgaattacggcaacaaatggggccgtcgatgcgctttgg
ggtagtatttacaacaccatttacgtcgctaattttattcttgaacggttaccatctgtg
ccaaatgtgaccgaagccacccgaaaacaggttacggccgaagcccgtttcttgcgcggt
tgggctaactttatcggggcctacaccttcggcgacattcctaaagtcacctccacgaat
caggtggctaatacgacgatcacccggtcggcaaaagcagatattctggcctctgttctg
gccgattatcaggccgcgctgaccgatctgcccaacgtgacctcggcttcgaccaatgca
acgaccaatgccgcttacatcaacaagataaattgccaggcagcaatggcccgcttttac
ctgtaccagaaaaactggacacaggctgagcaactggctacagttgtgattagctcgggc
gtgtattcgctgcaaaccaattactcggacgttgtcacaaaagattttaccaatgaatca
attattgaagtagggtacaacctgacggatgatcccggcacaggagcttacagcctgaat
aacctgctggtgggtcggcgggaagttattccatccaaccagctcgttagctcgctgctc
tcggtcgagtccggtacgcgtagtgcaaccattaccttcaatgcccagcagcagcgggga
aatgataatggctggacggtgcggaaatacggtaccgcttcggaagataacaacaacatt
gtgctgatacggctggccgaaatgtacctgattcgggccgaagccagagcacagcagggt
aaactaacgggtgcatcgggggctattgctgatctcaacgtgctccgtacccgggcaaaa
gcaccagccattacggcagccgctcaggcagatgtactcctcgccgtagagcgggaacgg
gtatatgaattggcgtttgagggccatcgctggtatgatctggttcggactggccgggcg
caggcggttatgtcggcgttttcccccaactggaacagccgctttgaactctggccgata
ccgcagcgggaaattcagcaaaacacagccttaacccaaaatccgggctattga
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