Spirosoma linguale: Slin_4380
Help
Entry
Slin_4380 CDS
T01156
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_4380
Transporters [BR:
sli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slin_4380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_16
TPR_6
TPR_14
TPR_19
Ig_SIBA-E_2nd
TPR_21
Motif
Other DBs
NCBI-GeneID:
8728140
NCBI-ProteinID:
ADB40361
UniProt:
D2QLS1
LinkDB
All DBs
Position
complement(5311984..5313420)
Genome browser
AA seq
478 aa
AA seq
DB search
MKKRILAILAVTATLSSCQDFLNLKPAYQISDQGFYQNQNDFETALVGVYSTTRGLYSSS
TIQYVGDLTTDNAEIQWSSPSADEMQLDQNGVTATNAYIRSVWNTCLYTISQSSNILNRI
DAVAFDPTVKNRIKGEAQFLRAFSYFYLVRMFGNVPVATQTFTSPAQVAAADLTLKPKEE
VYKLIVSDLTSAETLLPATAVTDKTRASQMTVKTLLGKVYLTQKSYDLAAAKLKEVIDAK
QYSLVVDYKTLSTNGNTNLPETILEVAYLSGQTLGNNYSALFTPAITSMAIFPGNAQGAG
RIVPTLDLIKAYETGDARKAVSVSDSVSLIGGKKSYSRYGLKFVDFKAVDPGDGSVSFTV
LRFADVLLMYAEALNEQGKTADALPSLNQVRQRAKLPALAGLSQADLRLALEQERRVEFL
YEGHRWFDLVRTGRAQTVLNAHYASQKLNFSVQDFELLFPIPQAEIDLNPTLKQNPGY
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcgaatactggccattctagcggtaacagccaccttatcatcctgtcaggat
ttcctgaaccttaaacccgcttaccagatcagcgatcagggtttttaccagaatcaaaat
gatttcgagacggcgctggttggtgtatacagcaccacacgggggctctatagcagcagt
accatccagtacgtaggcgacctaacgaccgacaatgccgaaattcagtggtcgtcgccc
tcggccgatgagatgcaactcgaccagaacggcgttacggcaacgaatgcctatatacgc
tcagtctggaatacctgcctgtacaccatctcgcaatccagcaatatcctgaaccggatc
gatgccgttgcctttgacccgaccgttaagaatcggattaaaggcgaggcccagtttctg
cgggcgttcagctatttctacctcgtgcggatgtttggcaatgttcccgtcgctacacaa
acatttaccagtccggctcaggtggcagccgccgacttgacgctcaaacccaaagaagag
gtgtataaactgatcgtgtcggacttgactagtgccgaaacactactgcccgcaacggcc
gtgacggacaagaccagagcatcgcagatgaccgtaaaaacgttgctgggcaaggtctat
ctaacgcagaagagttatgacctggccgctgcgaagttgaaggaagttattgacgctaaa
cagtattcgctggttgttgattataaaacgctgtcgaccaacggtaataccaatctgccc
gaaacgattctggaagttgcttatctctccgggcagacgctgggcaacaactactcggcg
ctgtttacccccgccattacgagcatggctatttttcccggtaatgcgcagggggcaggg
cgcatcgtgccgacgctggatttgataaaagcctatgaaacgggtgatgcccgtaaggcc
gtatccgtgagtgattcggtatcgttgattggcgggaaaaaatcctacagtcgatacggg
ttgaagtttgtcgacttcaaagcggttgatccgggcgacggcagtgtctcgtttactgta
ctacgctttgccgatgtgttgctgatgtatgccgaagcgctgaacgaacagggtaaaaca
gccgatgccctcccttctctcaatcaggtacgacaacgggctaaattgcctgctttggcg
gggctttcacaggccgatttacggctggcgctggaacaggaacggcgtgtcgagttcttg
tacgaaggccatcgctggttcgatctggtccgaacggggcgggcacaaacggtgctgaat
gcccattacgccagccagaaacttaatttttccgtgcaggatttcgagttactgtttccc
ataccgcaagccgaaattgacctgaatccaacgctaaagcaaaacccgggctattaa
DBGET
integrated database retrieval system
