Spirosoma linguale: Slin_4534
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Entry
Slin_4534 CDS
T01156
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_4534
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_4534
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
8728298
NCBI-ProteinID:
ADB40514
UniProt:
D2QNH8
LinkDB
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Position
complement(5498245..5500584)
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AA seq
779 aa
AA seq
DB search
MNIYKLFMASLVWAMTSLCALAQLSTYGLVFDAQTKEPLPGVTLVFTTGKGVVTDASGRF
SLVTNLTRVTVSAVGYRRQEVDLVPGQPVRIALEPAVEDLQTVVVTGNREAALRTETPIA
IAKLSARLINETKPTSIYEVINKTPGVLMVNLNNEQHMMAIRQPMTTNAYFLYLEDGVPV
RPMGVFNHNALLEMNQFTVSSIEVVKGPVSSIYGPEAVGGAVNFITQRPTAVPTVRAGIQ
VDQWGYQRVQVGAGARQGKFGMYVGGLLSRQRDSWLASSNYDKSSYFTRLEYAFSPKTRL
TGTVSYNDYNSQTSGSVDSTAFFARQYVSTTDFTYRKTVSFRSRLTLEHSWKNGSESFVT
GFARNNSVGQNPAYSIRWITGSPTATGQINSNDFRSYGVIAQHTQKLPFLNSKLIVGTTL
DLSPNSYYAYQTDLTAELRADKKSVIKYTQVRERPDNQLANYSAHIHNVAAYGQYDLEPV
TNLRLSVGLRYDRMAFDYTNALDGSSGGKDYSQLTPKLGMTYDLGKSKGLYANVSKGFSP
PALTSIFLKRTTPAATGELFYYNLQPARFTNMEIGGWASLLNHKLYIDGAFYQMNGTNEL
LNIRQPDNSTDYQSAGKTLHRGVELGITYRPSKQVFFRFGGTHAVHQFVEFTLSQRISDA
VRNVNGRDMPSAPRTLWNTEISYYPAWLKNFRTSVEWQHVAGWYQNQINTVRYGGYDFAN
VRAGYEWKGIEVFTNVMNVTNALFATNATRGNNATDRTTYTPAAPRTVVMGVQYTFSGK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctataaactgttcatggcctctctcgtatgggctatgacgtcactctgtgcg
ttggcgcagcttagtacctacgggcttgttttcgatgcccaaaccaaagaacccttaccc
ggcgtaacgctggtttttactaccgggaaaggcgtggtaaccgatgcctccgggcgattc
tcgctggttacgaaccttacccgcgttacggtttcggcggttggataccgtcggcaggag
gtggaccttgtaccaggccaacccgtccgcattgccctcgaacccgccgtcgaagacctg
caaacggtggtggtaactggaaatcgggaagccgccctgcgcaccgaaacgcccatcgca
atcgcaaaactgtcggcccgacttattaatgaaaccaagcccacgagcatctacgaagtc
attaataagacgccgggcgttctgatggtcaacctgaataatgagcagcacatgatggct
attcgccagccaatgaccaccaatgcgtactttctatatcttgaagacggcgtacccgtt
cggccaatgggcgtgttcaatcacaacgcgttgctggagatgaatcagttcacggtgagc
tccatcgaagtcgtgaaaggaccggtgtcgtccatctatggcccggaagccgtgggcggg
gccgtaaatttcatcacccagcgcccaacggctgtgccaacggttcgcgcaggcattcag
gtcgaccagtgggggtatcagcgtgtacaggttggcgcgggagcccggcagggtaagttc
gggatgtacgtgggcggactgctgtcgcggcagcgtgactcttggctggccagctccaac
tacgacaaatcgtcttattttacccggctcgaatacgctttttcgccgaagactcgcctg
acgggtaccgtttcgtacaacgattacaactcgcaaacgagtgggagtgtagacagtaca
gcgttttttgcccggcagtacgtgagcacaacggattttacctaccgaaaaacggtttcg
tttcgtagccgactcacgctggagcatagctggaaaaacggctcggagtcgttcgtaacg
ggctttgcccgcaacaacagcgttgggcagaatccggcttattcgattcgctggataacc
ggttcgccaacggcaacggggcagatcaacagcaatgacttccgcagttacggggtcatt
gcccagcatacgcagaagctgcctttcctgaacagcaaactcattgtgggtaccacgctc
gacctgtcgcccaattcgtattacgcgtaccagaccgacctgaccgccgaacttcgggcc
gacaaaaagtcggtgataaagtatacccaggttcgggagcggcccgataaccaactggcc
aattactcggcgcatatccataacgtagcggcttatgggcagtatgatcttgaaccggta
actaacctgcggctttcggttggcctgcgttacgaccggatggcctttgattacaccaac
gcgctggacggaagttcgggcggtaaagactacagccagctaacgcccaaactgggcatg
acctacgatctgggcaagagtaaagggttgtatgccaatgtatcgaaagggttttcgccc
ccggcacttacgtcaattttccttaaacgaacgacgccagccgccaccggcgagctattc
tactacaacctgcagcctgcccggtttacgaacatggaaataggcggctgggcttcgctg
ctgaaccataaactctatatcgacggggcgttttaccagatgaacggcaccaacgaactg
ctgaacattcgccagcccgataactcgaccgattaccagtcggcgggaaaaacgctgcac
cggggcgttgaactgggcattacctaccgaccatcgaagcaggtgttttttcggtttggg
ggcacccatgccgtgcatcagtttgtggagtttacgcttagccagcgcatatccgatgcc
gtacggaacgtgaatggcagagacatgccttcggccccacgcacgctctggaatacagaa
atcagctattatccggcctggctgaaaaatttccggacgtcggtagagtggcagcatgtg
gcgggctggtatcagaatcaaatcaacaccgtccggtatggtggctatgattttgccaat
gtccgggcgggttacgagtggaaaggcattgaggtatttacgaacgtgatgaacgtaacc
aatgcactgttcgccaccaatgccacccggggcaataacgccaccgaccgtactacctac
acgccagccgccccgcgcacggtggtgatgggtgttcagtacacgttttccggtaaatga
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