Spirosoma linguale: Slin_4555
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Entry
Slin_4555 CDS
T01156
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_4555
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_4555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
8728319
NCBI-ProteinID:
ADB40535
UniProt:
D2QNJ9
LinkDB
All DBs
Position
5522197..5524401
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AA seq
734 aa
AA seq
DB search
MKHLFSIGLLLFSAFSSFGQTSLLIRVEDSLTHAPVIAATVRTPSKPVIGNVTDANGLTR
LTNVPATVKTLVVSAVGYETESFPITTTADTLVFRLHSQDESLDEVTVTATRTNSRIEDL
PIKVEVLGQEDMDEESAVVPGNVSSILGDISIIHIQRTSAVNGNQAIRMQGLDPKYTQIL
RDGLPLYEGFSGNLGVLQIPPLDLKQVEVVKGSVSTLYGGGAIGGMINIVSKSPTSEKPT
FTALLNRSGLKESNSNAYYSQRYGKTGLTLFAGYTNQQAVDVTGDGYTDSPEIKQVNFHP
KFFYNPTDHTRMNIGYSFTDEHREGGYLPALEGTQPNAYRNITDLQRHTVDFDASHNTSE
TNAITLKGALSTFHRQNTDYQKLSDGRQSSLYLEGNNLKRFGKHQLIVGANLTVEAFRKN
PDSTRLVDYTYQTIGGFVQDDWQVGSTVAVQAGLRLDHHNTFGNFLLPRLSVKLKPSEPW
TVRLSVGTGYKTPNLFVNQTPGALNVSLIFPRLLPIDVANVKAEKSVGANMDIAYLKTFE
SGLSVQVDQAFYYTYVNSPVVSAFASTSSNLGAYTQLINAPYNLLSLGTDTYVRLEYDEL
ELYLGYNHTLSRRDGPSSLGPSDNTYLPLAPQDKFSTTLAWEPEHFRFGIEAAYVGSQYL
YNNQKVANYWFFAGAAEYHYNDHWRLVLNAENLFNIKQANYETVVSGPVTQPTFRPIWAP
LEGRIVNLALKFTL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatcttttctcaattggactgctcctctttagtgccttttcttcattcggacaa
accagtcttttgattcgggttgaagacagcctaacccatgcccccgttattgcggccacc
gttcgtacgccttcaaaacccgtaatcggcaatgtcaccgatgcgaatggcctaaccaga
ctaaccaatgtaccggctactgttaaaaccctggtggttagcgccgttggctacgaaacc
gagtcatttccgataactactaccgccgacacccttgtttttcggcttcatagtcaggat
gaatcactcgatgaagtgaccgttacggctacccgaaccaactcccgaatcgaagacctg
cccattaaagtggaagtactggggcaggaggatatggatgaagaaagcgcggtcgttccc
ggcaacgtgagcagcattctgggcgacatttccattatccatatccagcgaacatcggcc
gtcaacggcaatcaggccattcgaatgcaggggctcgaccctaaatacacgcagattctg
cgcgatggactaccgctttacgaaggattttcgggcaacctaggcgtcttgcagatccca
cccctggatttaaaacaggtggaggtggtgaagggctccgtgtcgacgctgtatggcggt
ggagctattggtggtatgatcaacatcgtatcgaaatcacccacctccgaaaaacccacg
tttacggctctccttaaccggtcgggcctgaaagaaagtaacagtaacgcctattattcg
caacgctacggtaaaacagggctgacgttatttgcgggctataccaaccagcaagccgtc
gacgtaacgggcgatggctacaccgatagcccggaaatcaaacaagtcaatttccacccg
aagtttttctacaaccccacggatcatacgcggatgaacattgggtactcgttcaccgac
gaacaccgcgaaggtggctatttgccagcgctggaaggtactcaaccaaatgcctaccgc
aatatcaccgacctgcaacggcacacggtcgatttcgacgccagccataacacgtctgag
accaacgccattacgctgaaaggtgctctgagtacgttccaccgccaaaataccgattac
cagaaactctccgacgggcgacagtcgtcgctctatctggaagggaacaatctaaaacgc
tttggcaaacaccagctcatcgttggtgccaacctaaccgttgaggctttccgcaagaac
cctgacagcacccggttggtcgattatacctaccaaaccatcggtggcttcgtgcaggac
gactggcaggtgggctcaacagtagcggtacaggcgggccttcggctcgatcaccacaac
acgttcggaaatttcctgctaccccgtttatcggttaaactgaaaccttccgagccgtgg
accgttcgactgagcgttggaacgggctacaaaacgcccaacctgtttgtcaaccagacg
cccggcgcgttgaacgtaagtctgatttttccgcgtctgctgcccatcgatgtggcgaat
gtgaaagccgaaaaatcggtgggtgccaacatggatattgcgtacttaaaaacctttgaa
agtggcttgtcggtacaggtcgaccaggcattttattacacctatgtcaactcgccggtg
gtatcagcctttgccagcacgtcgagcaatctgggcgcttacacccaactgatcaatgcg
ccgtacaacctgcttagccttggcactgacacttacgttcggctggagtacgacgaatta
gaactctacctgggctataaccacacgctatcccggcgcgatggcccgtccagtctgggc
ccctctgataacacgtacctccctctagctcctcaggacaaattttcaaccaccctggcc
tgggaaccggagcacttccgatttggcatagaagcggcttatgtgggttcccagtacctg
tacaacaaccagaaagtagcaaattactggttctttgcgggagccgccgaataccattac
aacgatcactggcgactcgtgctgaacgccgaaaacctcttcaatatcaagcaggctaat
tacgaaaccgttgtcagcggtcctgttacgcaacccaccttccggcccatctgggcacca
ttggaaggccggattgtaaatctggcactgaagtttacgttgtaa
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