Spirosoma linguale: Slin_4930
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Entry
Slin_4930 CDS
T01156
Name
(GenBank) glycosyl transferase family protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
sli
Spirosoma linguale
Pathway
sli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Slin_4930
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sli01005
]
Slin_4930
Lipopolysaccharide biosynthesis proteins [BR:
sli01005
]
O-antigen repeat unit
Slin_4930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
RT_RNaseH_2
TAGT
Endonuc_subdom
Motif
Other DBs
NCBI-GeneID:
8728694
NCBI-ProteinID:
ADB40908
UniProt:
D2QRK3
LinkDB
All DBs
Position
complement(6004664..6005533)
Genome browser
AA seq
289 aa
AA seq
DB search
MVVSNHIKGSDIAGVVILYNPHEQVFENIKTYLYQVSYLYVVDNSDNLTVNTNVSLKEIS
NIRYISNNGNKGVAYALNIASQTAIEDGYSYLLTMDDDSKAPSNMVMNMLNFLNSSSIYK
KIAILSAVHSKCGHLHLSKSVLYTMTSGNLLNLEAYQKVGGFNDGLFIDHVDHEYNIRVR
NAGFHIVELCSIKLQHRLGTLKSFTVFGKKIIYISHSPIRFYYFVRNGVYIVNKYSFSNP
KSVLKIIWILQKEIGKVLFLEDEKPKRMNYFLRGVIAGLQGSLGKLVNE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggtagtatcaaatcacatcaaaggatcagatattgctggtgttgttatcttgtataat
ccgcatgagcaggtttttgaaaatatcaaaacttacttataccaggttagttatttatac
gtggtagacaattctgacaatttaactgttaatacgaatgtttctttgaaagaaatatct
aatataagatatatatcaaataatggtaataaaggagttgcttatgcacttaatatagca
tcccaaactgctatagaagatggttattcgtatttattaactatggatgatgacagcaag
gcgccttctaatatggtaatgaatatgttgaattttttaaattcgtcctctatatataag
aaaattgctattttatctgccgtccacagtaagtgtggtcatcttcacttatccaagagt
gtactctatactatgacttctggaaatcttttaaatttagaagcgtatcaaaaagtaggt
ggttttaatgatggtttattcattgatcatgttgatcatgagtacaacataagggtacgt
aatgctggttttcatatagttgagttatgctctattaagctacaacatagattgggaacc
cttaagtcttttactgtatttggtaaaaaaataatctatatttcgcattctccgattagg
ttttattacttcgttcggaatggggtttatatcgttaataaatatagcttcagtaatcca
aagtcagtattaaaaataatatggatacttcaaaaagaaattggcaaagtgctctttctt
gaagacgaaaagccgaaaaggatgaattactttttgcgtggggttatagctggtcttcag
ggtagtttaggtaaacttgttaatgaataa
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