Spirosoma linguale: Slin_4978
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Entry
Slin_4978 CDS
T01156
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_4978
Transporters [BR:
sli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slin_4978
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Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
LPAM_1
Motif
Other DBs
NCBI-GeneID:
8728742
NCBI-ProteinID:
ADB40956
UniProt:
D2QRQ1
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Position
complement(6064862..6066592)
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AA seq
576 aa
AA seq
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MKKLLSILAIALGLSACDLNMLPQDAISPNTFFNTENDLLLYTNSFYNALPSAEDVYNED
VDNVVKNSLRDELQGTRVVPTSGGGWSWGTLRNINYFLANSGKCPDAKAVAKYNGLARFF
RAYFYFGMVKRFGDVPWYSKPIEVMDQEMLTKPRDPRTMVMDSVMADINYAIANLDASRQ
VTTVTKWTALALKSRIGLYEGTFRKYHTEFGLPNADKFLDESIAASADLMKNSGYTIYKA
TPATAYGKLFSSDNAIPDEVILARDFSDELQVYHNLNYYTMTASYGKPGLEKKLVNSYLM
ADGTRFTDIKGYETMQFAEEVQNRDPRLSQTIRTPGYTRIGETTPLVPEFGATVTGYQLI
KFVSAPEWDTFTKDITDMPIFRYAEVLLNYAEAKAERGTLTQADLDLSTKLTRDRVGMPN
INLADANANPDPYQAQQYTQLKGANMGVILEIRRERRVELVMENFFRWDDIIRWKEGQLL
TKTFKGMYFPGPGSYDLDKNGKVDLVIYEGTKPSVPGAQLLKLGSEILLENGNKGGNIVV
NGHINKKFNESRDYLYPIPTQERLLNTKLTQNPNWE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactactaagtatactggctattgcccttggtttgtcggcctgcgacctgaac
atgctgcctcaggacgctatttcgcccaatacgtttttcaataccgaaaacgacctgctg
ctgtatacaaactctttctataacgccctgccatcggccgaggatgtgtataatgaagac
gtcgacaatgtggtcaagaacagcctgcgcgatgagttgcagggtacgcgggtagtgcct
accagcgggggcggctggagctggggcaccctgcgtaatatcaattattttctggccaat
tcggggaagtgcccggatgccaaagccgtggccaaatacaatggactggcccgctttttc
cgtgcctacttttacttcggcatggtgaaacgctttggtgacgttccctggtattcgaaa
cccattgaggtgatggaccaggaaatgctaaccaaaccgcgcgacccccgcacgatggtg
atggattcggtgatggccgatattaattatgccattgccaatctcgatgcatcgcggcag
gtaacgaccgttaccaaatggacggcgctggccctgaaatccagaatcggtctgtacgaa
ggcaccttccggaaataccataccgaattcggtctgcccaacgccgataaatttctggac
gagagcattgcggcctcggctgatttgatgaagaacagcgggtacacgatttacaaagcc
acgcccgccacggcctacggtaagttattctcgtccgataacgccattcccgatgaggtg
attcttgcccgtgatttcagcgatgagttacaggtgtaccataacctgaattactacact
atgacggcttcgtacggaaagccgggcctggagaagaagctggtgaatagctacctgatg
gccgacggaacccgcttcaccgacatcaaaggctatgaaactatgcagtttgcggaggag
gtccagaaccgtgaccctcgtttgtcgcagactatccgcacacccggctacacccgtatt
ggcgaaacgacgccactagtaccggagtttggtgctacggttaccggctatcagctgatc
aagttcgtttcggcacccgagtgggatacgtttaccaaagacattacggatatgcccatt
ttccggtatgccgaggtgctgctgaactatgccgaagccaaagccgagcggggtacgctg
acccaggccgacctcgatctgtcgaccaaactcacccgcgatcgggtggggatgccgaac
atcaatctggccgatgccaacgccaaccccgacccgtatcaggcgcagcaatacacgcag
ttaaagggagccaacatgggggtaattctggaaatacggcgcgaacggcgcgtggaactg
gtgatggaaaatttcttccgctgggacgatatcatccgctggaaagaggggcaactgctc
accaagacatttaagggtatgtatttcccgggtccgggcagctatgatctggacaaaaac
ggcaaagtcgatctggttatctacgagggcactaaaccatcggtgccgggcgctcaactc
ctcaagctgggcagcgaaatcctgctggagaatggtaacaaaggcggtaacattgttgta
aacgggcatatcaacaagaaattcaacgagtcccgcgattacctataccccattccaacg
caggagcggctgttgaataccaaattgacccagaatccgaactgggagtag
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