Spirosoma linguale: Slin_5386
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Entry
Slin_5386 CDS
T01156
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
sli
Spirosoma linguale
Pathway
sli00860
Porphyrin metabolism
sli01100
Metabolic pathways
sli01110
Biosynthesis of secondary metabolites
sli01120
Microbial metabolism in diverse environments
sli01240
Biosynthesis of cofactors
Module
sli_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Slin_5386
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sli04147
]
Slin_5386
Enzymes [BR:
sli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
Slin_5386
Exosome [BR:
sli04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Slin_5386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-GeneID:
8729152
NCBI-ProteinID:
ADB41353
UniProt:
D2QF09
LinkDB
All DBs
Position
complement(6545989..6546972)
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AA seq
327 aa
AA seq
DB search
MNLIRRPRRNRQSAVIRDMVQETRLSVTDFILPVFIMEGQNLRSEVSSMPGIYRYSLDLL
LNEIQECVDLGVKTFDLFPNLPESRKDKYATESYNPDGLYPTAIRAIKERFPEVVIMTDV
AMDPYSSDGHDGIVENGKILNDPTLEVLGKMALAQAQAGANIIGPSDMMDGRVGYLRQVL
DEGGFHDVAIMSYAAKYASAFYGPFRDALDSAPKFGDKKTYQMNPANSREALIEAQLDFE
EGADFLMVKPALAYLDIIKLLNDNFHLPIAAYNVSGEYAMIKAAAQNGWLDGERAMMESL
MAIKRAGANVILTYFAKEAARYLLKNN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaatacgtcgcccgcgtcggaaccgccaatcggccgttatccgcgacatggta
caggaaacccgcctgtcggtcactgattttattttgccggtcttcattatggaaggccag
aacctccgttcggaagtatcgtctatgccgggtatttatcggtactcgctggatctgctg
ctcaacgaaattcaggagtgcgtagaccttggggttaaaacgttcgacctctttcctaac
cttcccgaatcccgcaaggacaagtacgccacggaaagctataaccccgatggcctgtat
ccgaccgccatccgggctattaaagagcgctttcccgaggtggttatcatgaccgacgtt
gccatggacccctatagttccgacgggcacgatggcatagtggaaaacggaaaaatcctg
aacgacccaacgcttgaggtattgggtaaaatggctttggctcaggcgcaggcgggtgcc
aacattattggtccgtcggatatgatggatggccgcgtgggctatttgcgtcaagtgctg
gatgaaggtggttttcacgacgttgccattatgtcgtatgccgctaagtacgccagtgct
ttttatggcccttttcgcgacgccctagactcggcgccgaagttcggtgataaaaaaacg
taccagatgaaccccgccaacagccgggaagccctcattgaagcccagctcgacttcgaa
gagggagccgatttcctaatggtaaaacctgctttagcttatctggacattattaaactg
ctgaatgataatttccatctgcccattgcagcctataacgtgagtggcgagtatgccatg
atcaaggcagcagcgcagaacggctggctcgacggagaacgcgctatgatggagtcactg
atggctattaagcgggcgggggctaacgttattttgacgtattttgctaaggaagcagcc
cgctatttgttgaaaaataattaa
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