Spirosoma linguale: Slin_5654
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Entry
Slin_5654 CDS
T01156
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_5654
Transporters [BR:
sli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slin_5654
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_19
TPR_6
TPR_8
HEAT_GCN1_fung
BDI_1685-like_C
TPR_2
TPR_21
Motif
Other DBs
NCBI-GeneID:
8729428
NCBI-ProteinID:
ADB41619
UniProt:
D2QS37
LinkDB
All DBs
Position
complement(6886043..6887578)
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AA seq
511 aa
AA seq
DB search
MKSTYWTSGIVAMGLFFGCSTSSLDKVNPNQVITANYYKNSAELLKGVNAVYAVWQSANL
TGREWFFLHDLRSDDVASGGGQLEAPRNQILSGAQNPGNGVALSVWNGLYRVIHRANVVI
DNGPAVTDNAALAKRVVAEAKFLRAMAYFDLTTFWGAVPLYTNYVTEVDGTKAKSSVDEI
YTLLTTDLLAVQTDLPATATGADLGRATKGAAQALLARVYMQKGDYASAKTQLQSIISSG
LYKLTANYLDNFIEETEFNTESIFEIGFSKIGDFNWDGDGNDNGANETMTRSQEYSAIGW
RNLIPSDGLLNEYENTAKGDAKTDPRLKYNFYFIGDAYNNGLNTLMESQVQGNTSVVNGV
TQKVSWRKYTAMYKNNETFYTSGINMRLIRYAEVLLMMAEAENETGNSANAIALLNQIRA
RASVAMPPYPTANYPVNSKAEVFRAVVHEKRVEQAGEQIRNRDILRWRAQNKLQTEPIPY
FAKGKQELLPIPQQELDNNSKLTQKDQNPGY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctacatactggacctcgggtatcgtggctatggggctgttcttcggatgcagc
accagcagcctggataaggtgaatcctaaccaggtcattaccgccaattattacaaaaac
tcggctgaattgctcaaaggcgtcaatgcagtttacgccgtctggcaaagcgccaacctg
accggccgcgaatggttcttcctgcacgatctccgctccgacgatgtagcctcgggtggc
gggcagctggaagcaccccgaaaccagattttatcaggtgctcagaatcccggaaacggc
gttgccttatccgtatggaacggcctttatcgcgttatccaccgggccaacgtcgtgatt
gacaatggccctgccgttacggacaatgcagctctggcaaaacgggtagtggccgaagcg
aagtttctccgcgccatggcttacttcgatctgacaaccttttggggagccgttccgctc
tataccaactacgttaccgaagtagatggcaccaaagcaaaatcgtcggtcgatgaaatt
tacactctgctgactaccgatctgctggccgttcagaccgatttgcccgctacagctacc
ggggccgacctcggccgggctaccaaaggggcggctcaggcactgctggcacgggtttat
atgcagaaaggcgattacgccagtgcaaaaacccagcttcagtcgatcatcagttcggga
ctttacaagctaacggctaactacctcgacaattttatcgaagaaactgaattcaatacc
gagtcgatcttcgagattggtttctctaaaatcggtgattttaactgggacggtgatggc
aatgataacggcgctaatgaaaccatgacccgcagccaggagtattcggccattggctgg
cgaaacctgattccatcagacggcttgctgaacgaatacgaaaacacggctaaaggcgac
gccaaaaccgacccgcgcctgaagtataacttctacttcattggcgatgcgtacaacaat
ggcctgaatacgttgatggagtcgcaggtgcagggaaacacgtctgtcgtgaatggggtg
acgcagaaagttagctggcggaaatacacggcgatgtataaaaacaacgaaaccttctac
acatccggcatcaatatgcggctaatccggtacgcagaagtgttgctgatgatggccgaa
gcagagaacgaaaccggcaacagtgctaacgccattgcgctgctcaatcagatacgggct
cgggcaagcgtagccatgccaccgtatcctacggctaactatccggtaaatagcaaggcg
gaagtgttcagggccgttgtccacgaaaaacgggtagaacaggcgggcgaacagattcgt
aaccgggatattctgcgctggcgggcccaaaacaaacttcagactgagccaataccctac
tttgctaaggggaaacaggaactgctgcctatcccacagcaagagctggacaacaatagt
aagttgacccagaaagatcagaatccgggatattaa
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