Spirosoma linguale: Slin_5655
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Entry
Slin_5655 CDS
T01156
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_5655
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_5655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
FecR_C
STN
MetallophosN
TTR_TEN1-4
EF-hand_5
Dockerin_1
Motif
Other DBs
NCBI-GeneID:
8729429
NCBI-ProteinID:
ADB41620
UniProt:
D2QS38
LinkDB
All DBs
Position
complement(6887603..6891097)
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AA seq
1164 aa
AA seq
DB search
MTQPLTAMTKQLIALGSLLLIGILPTRAQLVASSNRYASYQKQPTDTRLITLKSALSELE
QHYSVSFIYPTNLVDTKVSMVNQRNRNLETELASLLNSTGLTYRKVQPRFYAIVPEKEKS
TRLFRKIEQIETKTTTDPSTEAVRLPERTIDKLERIGWSTTSAQPLADITGKVLDKNGQG
IPGVSVVIKGTTRGTTTNTDGEYNLNAPNNAVLVFSFVGYASQEVAVANRSRINITLLDD
VKSISEVVVVGYGTQKRASVTGAISSVSAQEVTQLPVPSVEQAIQGRVPGVTVVSNGSPG
ETPIVRIRGIGSINYAANPLYVIDGFPTSDLNNFDTRDIESVDVLKDASSAAIYGSRAAN
GVIIVTTKKGSGDGKLHVNYDGYVGTQSAWRQLDLLNRDEYIQYGTALRTNAGQPVPTRF
SNLNQPIYTGASQTYAQTDTDWQKAVFRDAPITQHSVQLSGGNEKSRFYSSVGYFNQQGI
MIGTGYKRGNFRINSDHAISKRFSFGQTLTISYDDKLNEVSAGGRTQVQNMIRMTPYMPV
EDPTLLGGYRGPDGSDGSDPQNPVRAALQDQSNTQRMKILGSAYVDVKIIDGLTYRLRGG
IDYVTARTFSFLPIYSESFNARALANISDDRLTYASPLISNQLTYEKTFGKHSFNVVAVA
ERQAGNSLQIVGTGQAASNTIRELSAVISTSAGLNGTRSQNVLLSYLGRLNYEYAGKYLL
GASFRRDGSSRFAPGNKWGNFPSVSAGWRISEEAFLKNVPAISELKVRASYGTMGFNGIG
DYSWQVAVSQNTNAIIGGDRTQGTYFDRLGNTDLRWEVTKMSNVGVDLGLFSNSITLSAE
VYQRNTDGLILNQPIAPSIGYSQSPIVNVGSMRNTGVEMQLGYNKTKGALRFNASGNISF
INNKVLSLGPTVSPLLNGANADYGGFDITRTEAGQSIQYFYGWKVAGIFQNADEIKSAPT
QANAAPGDLRFVDANGDGKIDASDRVNLGSFLPKFTYGLNLSANYRGFDLSMFFQGVQGN
KIYNGVKVLEQGMLRLFNAGTDVLRAWTPTNTVTDVPRAVDGDPNGNSRTSDRFIEDGSY
LRLKNLSIGYSVPAGALQAFSRGTLSRARVYVASTNLLTFTKYTGYDPEVGSRTSNTNPT
LTNGIDYGQFPQARTFMVGLQLGF
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaacctcttactgccatgactaaacaattaattgcgcttggttcgttgctactg
attggaatactaccgactcgggcacagctcgtggcttccagcaatcggtatgcctcctat
cagaagcagccaacagatacccgcttgattacgttgaaaagtgcgttaagtgagcttgaa
cagcattacagcgtttcgtttatttatccaaccaacctggtcgacaccaaagtctcgatg
gtcaaccagcgtaatcggaatctcgaaacggaactcgccagtttactcaacagcaccggc
ttaacgtaccgaaaagtccagccccgcttttatgccattgtcccggaaaaggaaaagagc
acacggctttttcgtaaaatcgaacagatcgaaaccaaaactactaccgatccatcgaca
gaagccgtaaggttacccgaacgcaccatcgacaaactggagcgtattggatggtctact
acatcggcccagcccttagccgacattacgggtaaagtactggacaaaaacgggcaggga
attccgggggttagtgttgttattaaaggcaccacacgaggcactacgaccaatacagac
ggggagtacaacctcaatgccccgaataacgcggtgctggtattcagttttgtcggttat
gcctcgcaggaagttgccgtagccaaccgaagccgcattaacattaccctgctggacgat
gtaaaatccatcagcgaagtggttgttgtcggttacggtacccagaaacgggcgtcggta
acgggtgctatctcgtcggtatccgcccaggaggtaacacaactgcccgtaccgagcgtg
gagcaggccattcagggacgcgtgccgggcgtaacggtcgtgagcaacggctcccccggc
gaaacacccattgtgcgtattcggggcattggttccatcaactacgcggctaacccgctg
tacgttatcgacggttttccgacgagtgacctaaacaacttcgacacccgcgacattgag
tcggtcgatgtattgaaagatgcctcctcagccgccatctatggctcacgggcggccaat
ggcgttatcattgtcacgaccaaaaaaggtagtggagatggtaaactgcacgtcaactac
gacggctacgtaggcacacaaagtgcctggcgtcaactcgatctactcaaccgggacgag
tacatccagtatggcactgccctccggaccaatgccggtcagccggtgccaacgcggttc
agcaacctgaatcagcccatttatactggggcttctcaaacgtacgctcaaacggatacc
gactggcagaaggccgtattccgggatgcgcccattacgcagcatagcgttcagttatcg
ggcggtaacgaaaagtcgcgtttctattcatctgtcggctatttcaatcaacagggtatc
atgattggcacggggtacaagcgcggcaacttccgcatcaactccgaccatgccattagc
aagcgcttctcattcgggcaaacgctgaccatctcctacgacgataagcttaacgaagta
agcgccggaggccggacacaggttcagaacatgatccgcatgacaccttacatgcccgtt
gaagaccctaccctgctcggcggttaccgtggtcccgacggctccgacggctctgacccc
caaaacccggtacgggccgcgctacaggaccagagcaacacccagcgcatgaaaatcctg
ggaagtgcttatgtcgatgtcaagatcattgacgggctgacctaccgcctgcgcggaggt
atcgactacgtaacggcgcgtaccttttccttcctgccaatctacagtgagagtttcaac
gcccgggcgctggccaacatttccgacgaccggctgacgtacgcttctcccctgatctcc
aatcagttgacctacgaaaaaacatttggcaaacacagcttcaatgtcgttgccgtagcc
gaacggcaggcgggcaacagccttcagatagttggaacaggccaggccgcttcaaatacg
attcgcgagttgagcgccgttattagtacgagtgcgggtttaaacggcactcgctctcaa
aacgtgctgctgtcgtatctgggtcgccttaattacgagtacgcgggtaaataccttctg
ggtgcctcgttccggcgggatggctcgtcgcggtttgcaccgggtaataagtggggtaat
ttcccatcggtgtcagcgggctggcggattagtgaagaagctttcctgaaaaatgtaccg
gctatttcggaattgaaggttcgtgccagctatggtacgatgggcttcaatggtatcggc
gattactcgtggcaggtggccgtctctcagaacacgaacgccatcatcgggggcgaccgc
acgcagggaacctacttcgaccgtctgggcaacaccgacctgcggtgggaagttacgaag
atgagtaacgtcggggttgatctgggcttgttcagcaacagcataaccctctcggccgaa
gtttatcagcgaaatacggacggcctgattctgaaccagcccattgcgccatccatcggt
tattcgcaatcgcccattgtcaacgtgggcagcatgcggaatacgggggtcgaaatgcaa
cttggctataacaaaacgaagggcgctcttcgattcaacgcatcgggcaacatcagcttt
attaacaataaagtgctgagcctcgggcccaccgtgtcgcccctgctcaatggtgccaac
gccgattacggcggattcgacattacccgtaccgaagccggtcagtcaattcagtacttc
tacggctggaaagtagcgggtatcttccagaatgccgacgaaatcaaatcagctccaacg
caggccaatgccgcgcccggcgaccttcgctttgtcgatgcaaacggcgatggcaagatc
gacgccagcgaccgggtaaacctgggcagcttcctgccaaaattcacttatggactgaac
ctgtcggccaattaccgcggcttcgatctatcgatgttctttcagggtgttcagggcaac
aaaatttacaacggcgtaaaagttcttgagcagggtatgctccggttgttcaatgccgga
acggatgtgctgcgggcctggacaccaaccaatacggtgaccgacgtaccccgtgccgtt
gatggcgaccccaatggtaactcgcgtacgtcagaccggttcattgaggatggctcctac
ttacggctgaaaaacctgagcatcggctattcagtaccagcgggtgcgttacaggcattt
tcgcgcggtaccctgagccgggcgcgggtctatgtagcatcgaccaatctgctgacgttt
acgaaatacactggctacgaccctgaagtgggctctcgcaccagcaataccaacccaacg
ctgaccaatggtatcgactatggacagtttccgcaggcacgcaccttcatggtaggtctt
caacttggtttttaa
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