Spirosoma linguale: Slin_5760
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Entry
Slin_5760 CDS
T01156
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sli
Spirosoma linguale
Pathway
sli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Slin_5760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sli03021
]
Slin_5760
03400 DNA repair and recombination proteins [BR:
sli03400
]
Slin_5760
Enzymes [BR:
sli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Slin_5760
Transcription machinery [BR:
sli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Slin_5760
DNA repair and recombination proteins [BR:
sli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Slin_5760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Methyltrn_RNA_3
RAD51D_N
Motif
Other DBs
NCBI-GeneID:
8729535
NCBI-ProteinID:
ADB41725
UniProt:
D2QSE3
LinkDB
All DBs
Position
complement(7009238..7010227)
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPDKVVVEKADDFHGVFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVKFP
GVLHEFSSIEGVVEDVTEIILNLKMVRFKKINDMVDNKITVNIKKQSVLKAGDISKFSPS
FEVLNPELEICHIDDTRDLEMEIFVEKGRGYVPSDEPRVNELPFGHIPIDAIYTPIKNVK
YSVENTRVEQKTDYERLLLDIETDGSIHPEEALKGAAYILIQHFMLFSDQTMTFETAKPE
EENVVDEEVLHMRKLLKTSLADLDLSVRAYNCLKSADVRTLGDLVRLEISDMMKFRNFGK
KSLTELEQLVAEKNLTFGMDVAKYRLDED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttagcgttccaaatgcccgacaaagtcgtagtggagaaagctgacgacttt
cacggggtgtttgaattcaaaccccttgaaaaaggatacggtgtaacaatcggtaatgcg
cttcggcgtattttgctgtcatcactggaaggatacgccatcacaagcgtgaaatttccc
ggtgtgttgcatgagttttcatcaattgagggcgtcgttgaagacgtgacggagatcatt
ctgaacctgaaaatggttcgtttcaagaagatcaatgacatggtcgacaacaagatcacc
gtcaatataaagaaacaatcggttttgaaagccggtgatatatccaagttttcgccttcg
ttcgaggtgctgaatccagaactggaaatctgccacatcgatgacacgcgtgacctggaa
atggaaattttcgtggaaaaaggtcgtggatacgttccatccgatgaaccacgggttaac
gagttgcctttcggtcatattcccatcgatgctatttacacgccaatcaaaaacgtgaaa
tatagcgttgaaaatacgcgggttgagcagaaaactgactatgagcggttgctgttagac
atcgaaacggacggatcaattcacccggaagaagcgctgaaaggtgcggcttacattctg
attcagcacttcatgctgttctcagatcagacgatgacgtttgaaacggctaaaccggaa
gaggaaaatgttgtggacgaagaagtactgcacatgcgcaaacttctgaaaacgtcgttg
gcagatctcgatctgtcggtacgggcttacaactgtctcaaatcggctgacgttcggaca
ttgggtgatcttgttcggttagaaatttccgacatgatgaagttccgtaacttcggtaag
aagtcgctgacggaacttgagcaacttgttgcagagaaaaacctgacgttcggtatggac
gtcgctaagtacagactagacgaagattaa
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