Spirosoma linguale: Slin_5830
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Entry
Slin_5830 CDS
T01156
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
sli
Spirosoma linguale
Pathway
sli00730
Thiamine metabolism
sli01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Slin_5830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sli03009
]
Slin_5830
Enzymes [BR:
sli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
Slin_5830
Ribosome biogenesis [BR:
sli03009
]
Prokaryotic type
GTPases
Slin_5830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
RsgA_N
FeoB_N
MMR_HSR1
nSTAND1
AAA_16
GTP_EFTU
AAA_29
eIF-1a
Ras
AIG1
AAA_23
ABC_tran
AAA_30
TsaE
nSTAND3
AAA
SMC_N
CusF_Ec
RNA_helicase
AAA_22
IIGP
Septin
DUF815
Motif
Other DBs
NCBI-GeneID:
8729605
NCBI-ProteinID:
ADB41795
UniProt:
D2QSL3
LinkDB
All DBs
Position
complement(7071565..7072491)
Genome browser
AA seq
308 aa
AA seq
DB search
MQNGLVIRSTGSWYEIRNPDGHIFQGRLKGKFKLKGLKVTNPIAVGDRVVFDVEDEAENT
AIITDISPRDNYIIRQSVHKTAHGHILAANIDQAVLLATLAMPRTSAGFIDRFLVSAESF
RIPTTIVFNKIDILNEEGLAFQQEIIDLYERIGYNCLSTSATEGVGVEAFRELLDQKVTL
VAGHSGVGKSSLVNAIAPGLNLRTNEVSSFANKGVHTTTFAEMFELSPNTFIIDTPGIKE
LGLMDTSKTEIGHYFPEMRDRLNQCRFNNCLHINEPGCAIKEAVAEEEIAESRYMSYLSM
IEGGDNRR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaacggcttagtcatacggtcaaccggctcctggtacgagattcgtaacccagac
ggacatatttttcagggtcggctgaaagggaaattcaaactcaaaggcctgaaggtcacc
aacccaattgccgtgggcgaccgggtggtatttgacgtggaagatgaagccgaaaacacg
gccatcatcaccgatatttcgccccgcgacaattacatcatccggcagtcggttcacaaa
acggctcatgggcacattctggcagctaatatcgaccaggccgtcttgctggcaacgctg
gccatgcctcgtacatcagcgggattcatcgaccggtttctggtatcagccgaatcgttc
cgtattccaacgaccattgtcttcaataaaatcgatattctgaacgaagaaggactggcc
tttcagcaggaaattatcgacctgtatgagcgcatcggctataactgcctgtctacatcg
gctactgaaggcgtaggtgtggaagcttttcgcgaattactcgatcagaaagtaacgctg
gtggccgggcactcgggcgttggcaagtcgtcgctcgttaacgccatcgccccaggtctg
aatctgcgcaccaacgaggtgtcgtccttcgccaacaaaggtgttcacacgacgaccttc
gccgaaatgttcgaactctctcccaatacgtttatcatcgatacaccgggtatcaaggaa
ttgggtttgatggacacttcaaagaccgaaatcggccactacttccccgaaatgcgcgac
cgtctgaaccagtgtcgcttcaacaactgcctgcacatcaacgaacccggctgcgccatc
aaagaggccgttgccgaagaagaaatcgccgaaagccgctatatgagctacctgagcatg
attgaaggcggagataataggcggtaa
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