Spirosoma linguale: Slin_5895
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Entry
Slin_5895 CDS
T01156
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sli03400
]
Slin_5895
DNA repair and recombination proteins [BR:
sli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Slin_5895
Archaeal homologous recombinant proteins
Slin_5895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-GeneID:
8729673
NCBI-ProteinID:
ADB41858
UniProt:
D2QSS6
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Position
complement(7139979..7141205)
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AA seq
408 aa
AA seq
DB search
MKILHTADWHLGKRLQDFQRLQEQRDVLAEIVQVANQEDVDLVLVAGDLFDTFNPDPKAE
DLLYSTLKELTANGRRTVVAIAGNHDNPDRIEAQDHFGRECGIIFAGFPKTEVRSYELSC
DAKLLCSAPGFIELKLPRHDAPVRIIMTPYANETRLRSYLGMVSLDDELRQHLHQHWSAL
ADTYMDEQGINLLMAHLFVMKRGGEQPEESDDERSILQVGGASVVYTDMIPPQIQYTALG
HLHRYQQIAGGPSPVIYSSSPLAYSFAEADQQKYVVLVDAEAGQPVTVTPVPLATGKRLL
RPKFKRVDEAVDWLRENPNCYAEITLQTPTFLTSDERRQLQQAHESLVTIIPDVRDVEET
EQETAPAIDLSQPMEALFTSYFKNKNKGQEPNERLQHLFKEILATEPE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactacatacggcagactggcatctgggaaagcgacttcaggattttcagcgc
cttcaggaacaacgagacgtattggctgagattgttcaggtagccaatcaggaagatgtt
gacctggttttggtagcgggtgatctgttcgatacgtttaatccagaccctaaagccgag
gacctattatatagtacactgaaagaactgacggcaaatggtcggcggacagtggtggcc
attgcaggaaaccatgataatccggaccggatcgaagcgcaggatcatttcgggcgagag
tgcggaatcatctttgctgggtttccgaaaactgaggttcgttcgtatgagttaagctgc
gatgccaagctgctttgttctgcaccgggctttatcgaactgaagctgccccggcacgac
gcgcccgttcgtattatcatgacgccctatgccaacgagacccggcttcggtcgtatctg
ggtatggtgagtcttgacgatgagctccggcagcatctgcaccagcactggtcagctctg
gctgatacctatatggatgagcagggcatcaatttattaatggcacatctgtttgtcatg
aaacgggggggagagcagcccgaagaatcggacgatgagcgtagtattttacaggtgggt
ggcgcatcggtcgtgtatacagacatgattccgccccagattcagtatacggcactgggg
catttgcaccggtatcagcaaatagcaggcgggccttctcctgttatctatagcagcagc
ccgttggcgtatagttttgccgaagccgatcagcagaaatacgtcgttcttgttgacgct
gaagccgggcaacccgttacggttacgcccgttcctcttgctactggaaaacgattgttg
cgtccgaagttcaagcgggttgatgaagcggttgactggctgcgggaaaacccgaattgc
tatgccgaaataactctgcaaacgccaacgtttctgacaagtgacgaacgtcggcaactt
caacaggcgcacgaatcactggtgacgatcatcccggacgtacgcgatgtagaagaaaca
gagcaggaaacggcgcccgccatcgaccttagccagcctatggaagcgctgttcacgagt
tattttaagaataagaacaaggggcaggagccaaacgagcggctacagcacctgttcaaa
gagattttagctaccgaacctgaatga
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