Spirosoma linguale: Slin_5959
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Entry
Slin_5959 CDS
T01156
Name
(GenBank) squalene/phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
sli
Spirosoma linguale
Pathway
sli00906
Carotenoid biosynthesis
sli01100
Metabolic pathways
sli01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Slin_5959
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sli01006
]
Slin_5959
Enzymes [BR:
sli01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
Slin_5959
Prenyltransferases [BR:
sli01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Slin_5959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
8729740
NCBI-ProteinID:
ADB41921
UniProt:
D2QSY9
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Position
complement(7224372..7225208)
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AA seq
278 aa
AA seq
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MMALFNKTALECSKLITEQYSTSFTLGIKTLDRKFHLPIYAIYGFVRYADEIVDTFHDYD
KKTLLLRFKHDTYQAIEEGISLNPILQSFQLVVNEYKIEHELIEAFLKSMEMDLYYQDYD
AKGYKEYIYGSAEVVGLMCLRVFCEGDLAEFDRLRGAACKLGSAFQKVNFLRDLKSDFVD
RGRTYFPGVDFKDFGVEAKRLIEADIQQDFDEAYIGIMNLPRGARMGVYLAYIYYQTLFN
KIKQLSATRIQRERVRVPNPQKFALLAQTYVKYRLNVL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgatggcattgttcaacaaaacggcactggaatgcagtaaactaattactgagcagtac
agcacgtcgtttacgttaggtatcaaaacgcttgaccgtaaatttcacttacctatctat
gccatctatggatttgtccgatatgccgatgaaattgtggataccttccacgattatgac
aaaaaaacgcttctactacggttcaagcatgatacgtatcaggctattgaggaggggatt
agtctcaaccccatattgcagtcctttcaacttgtggtgaatgagtacaagattgagcat
gagctgattgaggcttttctgaaaagtatggagatggatctgtattatcaggattatgat
gccaagggctataaggagtatatttatgggtcagctgaggtggttggtctgatgtgcctg
cgggtcttttgcgagggcgacctggccgaatttgaccgccttcggggagccgcctgtaaa
ttggggtcggcttttcagaaagtgaatttcctccgcgatctcaaaagtgattttgttgat
cggggacgtacctatttccccggcgtcgactttaaagactttggtgttgaagccaaaaga
cttatcgaagcggatattcagcaggacttcgatgaggcttacattggcattatgaatttg
ccacggggggctagaatgggcgtttatctggcctatatctattaccaaacgcttttcaat
aagatcaagcaactgtcggccacgcgcattcaacgggagcgggtcagagtacctaatcca
caaaaatttgccctgcttgcccaaacgtacgtcaagtatcggctcaacgtcctgtaa
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