Spirosoma linguale: Slin_6012
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Entry
Slin_6012 CDS
T01156
Name
(GenBank) Helix-turn-helix type 11 domain protein
KO
K13573
proteasome accessory factor C
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sli03051
]
Slin_6012
Proteasome [BR:
sli03051
]
Prokaryotic proteasome
Bacterial regulatory particles
Slin_6012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WYL
HTH_11
SgrR_N
HTH_IclR
HTH_20
MarR
WCX
HTH_24
HTH_PafC
HTH_23
HTH_31
HTH_29
TrmB
HVO_A0114
DUF5053
RRF_GI
HTH_DeoR
HTH_27
Dimerisation
Rrf2
HTH_28
HVO_A0261_N
Motif
Other DBs
NCBI-GeneID:
8729793
NCBI-ProteinID:
ADB41974
UniProt:
D2QT42
LinkDB
All DBs
Position
7293395..7294288
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AA seq
297 aa
AA seq
DB search
MAAQQNLTRTLKLIRLLKQRPGKTLSQLAQLLECSHRHARRFMESLEEAGFIIDSEGKRP
PRFYLYEDERRQQADFTEEEAQLLQEALSSISGINPLLAPLRQKIYQHSTLLPLANGLID
QHQSQVVARLAEAIRDRRQVWLLRYHSINSNSISDRLVEPYSFSENYTILTAYEPESETT
KTFKTQRIEDVSLLDSPQENPPSEVLTDPFGWPGEQKEVSLRLTYQAYHLLREEYPATRP
ELTHIADDAPFSYTYTGDVRSWIGLGRFVLGLPGEIKVDGPEEFREYLRGRVGDYIL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccagcagaacttgacgcgtacgctcaaactgatccgattgctcaaacagcga
cccggtaaaaccctctcgcaactggcccaacttctggaatgcagccatcgccacgcccgg
cgatttatggagtctttggaagaagccggtttcattatcgacagcgaaggtaaacgtcct
ccccgcttttacctgtacgaagatgagcgtcggcaacaggccgatttcacggaagaggaa
gcccagttacttcaggaggctctgtccagcatctccggtataaaccccttgctggctccg
cttcgccagaaaatataccagcattctaccctgcttcccctcgccaatggcctgatcgac
cagcaccagagccaggtagtggcgcgactcgccgaagccatccgcgaccggcggcaggtg
tggctgttacgctatcattccatcaatagtaattcgattagcgaccgactggttgagcct
tacagtttttcggagaactacacgatcctaacggcctatgaacctgagtcggagacaacg
aaaacctttaagacgcagcgtatagaagatgtgtctctgctcgattctccgcaggaaaac
ccacccagcgaagtacttactgatccattcggctggccaggggagcaaaaagaagtgtcg
ttacgacttacctatcaggcgtatcatctattaagagaggagtatcccgctacacgccct
gagctaacccatatagccgacgatgcccctttttcgtacacctataccggcgacgtacgg
agctggattggcctcggccggtttgtgctgggcttgcccggcgaaataaaagtggatggc
ccggaagagtttcgggaatatttacgaggacgagtaggggactacattctttag
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