Spirosoma linguale: Slin_6054
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Entry
Slin_6054 CDS
T01156
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_6054
Transporters [BR:
sli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slin_6054
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-GeneID:
8729835
NCBI-ProteinID:
ADB42016
UniProt:
D2QT84
LinkDB
All DBs
Position
7347634..7349133
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AA seq
499 aa
AA seq
DB search
MKTFQKLITYTCIGGLVIASGCSKSFLDVPPQGQQTPTDFFSSNADAATSLVNAIYSKMV
DWNFHSFSWNGITSIASDDADKGSSPGDTGTDKDQLDNFTFTPSSVSFNEVWGGHYEAIA
RANQALDNLPALTINDTLKNRLIGEASFLRAYCYFNLVRSFGGVPLITKVADPTNASDIQ
QGRVRATAAQVYTQIETDLATAVANLPEKSQYNAADLGRATKGAAKALLAKVSMYEKKWN
VVLQLTDEIIASGQYSLQPNYAELWRESSENGVESIFEIQGRGVTPNKGVQGYFETQGAR
GENGWGWGFNTPSEDLVKAYETGDTRKNGTIIQRGMTLWDGRVVSPNAENPYYNMKAYVS
FSRETNNGNTWETSKNVRVLRYAEVLLMNAEAANELGQPTKALTALNQVRARARGGVATA
LPNVTTTAQTGLRQAIWNERRVELAFEHDRYFDLVRQGRAAAVFQALGKNFVAGKHEIFP
IPQPQIQLSGGQLTQNPGY
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgtttcagaaactcattacatacacctgcattggcggtctggtgattgccagt
ggctgttccaaatcgttcctggatgtgccgccccagggccagcaaaccccaacggacttc
ttttcgagtaatgccgatgcggctacaagccttgtcaatgccatttattccaagatggtc
gactggaatttccactccttctcgtggaatggcattacgagtattgcttcggatgatgcc
gataaaggcagctcgccgggcgataccggcaccgacaaagatcagctggataatttcacg
tttaccccttcgagtgtttcgttcaacgaagtgtggggtgggcattacgaagccattgcc
cgcgccaatcaggcattggacaatctcccggcgctgacgatcaacgacaccctgaagaac
cggctcatcggcgaagccagcttcctgcgggcctactgctacttcaacctcgttcgctcg
tttggcggggtgccgctgatcaccaaagtggccgacccaaccaatgccagcgatattcag
caggggcgggtgcgggcaacggcggcacaggtgtacacgcagattgaaacggatctggca
acggccgtcgccaatctgcccgagaaatcgcagtataacgcggccgatttgggccgggct
accaaaggagctgccaaagccctgctggctaaagtgtccatgtacgaaaagaagtggaac
gtggtgctgcaattaaccgatgagatcattgcttcggggcagtactcgctgcaacccaac
tatgctgaactctggcgcgaatcgtcggagaatggagtggagtcgatcttcgagattcag
ggccggggtgtaaccccgaataaaggggtgcagggctactttgagacacagggtgcccgg
ggcgagaatggctggggctggggtttcaacacgccatccgaagacctggtgaaagcctac
gaaaccggcgatacccggaaaaatggcaccatcattcagcgtggtatgacgctctgggat
ggccgggtagtgagcccgaacgccgaaaatccatattataacatgaaagcgtacgtgagc
ttcagccgggaaacgaacaacggcaacacctgggaaacgagcaagaatgttcgggtgcta
cgttatgctgaagtgctgctgatgaacgccgaagccgccaacgaacttggccagccaacc
aaagccctcacggcgttgaatcaggtgcgggcccgggcgcggggtggtgttgcaacggcc
ttgccaaacgtaacgacaaccgcccagaccggtttacgtcaggcgatctggaacgagcgt
cgggtcgagttagcgtttgaacacgaccgctatttcgatcttgttcgtcagggacgcgca
gcggctgtttttcaggccctcggcaagaattttgtagccggtaagcacgaaatattcccg
attccacagccgcagattcagttgagcggtgggcagttgacgcagaatccggggtattag
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