Spirosoma linguale: Slin_6087
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Entry
Slin_6087 CDS
T01156
Name
(GenBank) RimK family alpha-L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sli03009
]
Slin_6087
Ribosome biogenesis [BR:
sli03009
]
Prokaryotic type
ribosomal protein modification factors
Slin_6087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
Dala_Dala_lig_C
R2K_3
Motif
Other DBs
NCBI-GeneID:
8729868
NCBI-ProteinID:
ADB42049
UniProt:
D2QTB7
LinkDB
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Position
complement(7382506..7383414)
Genome browser
AA seq
302 aa
AA seq
DB search
MRIAILSANPNLYSTQRLLEAANQRGHEGVLINHLNCQVMIEGGKPTVLYEGQELDSFDA
IVPRIGASVTDYGCAVVRQFEMMNVFTTGKSQAIMRSRNKLRSLQVLSKAGVGLPKTIFA
NHPKNGDVTQLIKLVGGPPVVIKLLEGTQGIGVVLAETTKAAKSTIEAFYGLKKHVLVQE
FVAEAKGSDIRAFVVGGRVVGAIKRQGLEGEFRSNIHRGGNAVTVTLTPDEEQTAVAAAR
ALGLKVAGVDMLPSDRGPLVLEVNSSPGLEGIEKATGVDIATEVIAYIEEKIRTDEGDTV
GV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattgccattttatcggccaatccgaatttatattcaacgcaacgactcctcgaa
gcggccaaccagcgcggccatgaaggggtactgatcaatcatttgaactgtcaggttatg
attgaaggcggaaagcccacggtgctctacgaaggtcaggaactggattcgttcgatgcc
attgtgccccgcattggggcctccgtcacagattacggctgtgccgttgtccggcaattt
gagatgatgaacgttttcaccacgggcaaatcgcaggccattatgcgttcgcgcaataag
ctgcgaagccttcaggtactttcgaaagcaggagttggcttacccaaaacgattttcgcc
aatcatccgaaaaacggcgatgtcacgcagttgatcaagctggtgggtggcccgccggtt
gttatcaaactgctggaaggcacgcagggaatcggggtggtgctggccgaaacgactaaa
gcggccaaatcgaccatcgaggctttttacggcctaaaaaaacacgtgctggtgcaggag
ttcgtggccgaagccaaagggtccgacattcgggcgtttgtggtaggtggtcgtgtggtg
ggggcgataaaacgccaggggctggaaggcgaattccggtccaacattcaccggggcggt
aatgccgtgaccgtaacgctcactcccgacgaagagcagacagccgtagcagccgcccgc
gccctgggccttaaagttgccggtgtggatatgctcccctccgaccgtggcccgctggtg
ctggaagtaaactcatcgcccggcctggaagggattgaaaaagctacgggcgtcgatatt
gccaccgaagtcattgcttacatcgaagaaaaaatccgcaccgacgaaggcgacacggtg
ggcgtttaa
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