Spirosoma linguale: Slin_6109
Help
Entry
Slin_6109 CDS
T01156
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sli
Spirosoma linguale
Pathway
sli00071
Fatty acid degradation
sli00280
Valine, leucine and isoleucine degradation
sli00310
Lysine degradation
sli00362
Benzoate degradation
sli00380
Tryptophan metabolism
sli00410
beta-Alanine metabolism
sli00640
Propanoate metabolism
sli00650
Butanoate metabolism
sli00907
Pinene, camphor and geraniol degradation
sli00930
Caprolactam degradation
sli01100
Metabolic pathways
sli01110
Biosynthesis of secondary metabolites
sli01120
Microbial metabolism in diverse environments
sli01200
Carbon metabolism
sli01212
Fatty acid metabolism
Module
sli_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Slin_6109
00650 Butanoate metabolism
Slin_6109
09103 Lipid metabolism
00071 Fatty acid degradation
Slin_6109
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Slin_6109
00310 Lysine degradation
Slin_6109
00380 Tryptophan metabolism
Slin_6109
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Slin_6109
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Slin_6109
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Slin_6109
00930 Caprolactam degradation
Slin_6109
Enzymes [BR:
sli01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Slin_6109
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Slin_6109
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Slin_6109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
2-Hacid_dh_C
NAD_binding_2
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
8729890
NCBI-ProteinID:
ADB42071
UniProt:
D2QTD9
LinkDB
All DBs
Position
complement(7405274..7407430)
Genome browser
AA seq
718 aa
AA seq
DB search
MINYTVDQQIAIISWAMTSSPMNVLNDESIPEFEAALQRAFTDESVKGLIITSAKPEFVA
GADLKMILRANDKPPAEMLKVSSELNRVFRSIETSGKPTVAAINGTALGGGYEICLACHH
RVALNNPKTVIGLVEVTIGLLPGAGGTQRLPRMIGIQAALPLILEGRKVSVQEAKNLGMI
DDIADTPDEMMAQARAWIDANGTSAGQKPLKPWDEIDRKTGKIVGKDNFKVPGGNVQSPV
GAQTFAAGTAMLMDKTKGNYPAPLEIMACVYEGLQVNIDRALMIEARHFVKVATSKVAKN
LIQTMFLGMNEANKGASRPKDYPKTDVKKLGILGAGMMGAGIAYVSAQTGIEVILKDVSV
EAAEKGKDYSRNLLKKGVERGKVDPAKVDGILNLIKPTADVQDLQGCDLIIEAVFENREL
KAQVTREAEPMLAENGLGVFGSNTSTLPISGLAQASGKPENFIGIHFFSPVDKMMLVEII
MGQQTSDYALAVAIDFTRKIRKTPIVVNDARGFYTSRCFSTYSSEGMELLKEGVNPILIE
NAGKDAGMPVGPLAVTDEVALDLVYKITGQGIKDGAVREDDTSYQVARTFVELGRTGKKA
KAGFYDYQDDRSKKLWPGLQDLFPQAEQQPTLDEVKTRLLYRQAIEAVRCFEENVVRTKL
DADLGSILAWGFPAYTGGAVSFVDFVGVDTFVKTLDRLADQYGDRFLPTAALRERAQV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgataaactacactgtcgaccagcagattgctatcatttcgtgggcgatgacctcctct
cccatgaacgttcttaacgacgaatcgatcccggaatttgaagccgccctccaacgtgcc
tttactgatgagtcggtgaagggcctgattattacctctgccaagcctgaattcgtagcc
ggtgccgacctcaaaatgatcctgcgcgctaacgataagcctcccgccgagatgctgaag
gtctcatcggagttgaaccgggtgttccggagcatcgaaacgtcgggcaagcctaccgtt
gccgccatcaacggtacggcgctggggggcggttacgaaatctgtctggcctgccaccac
cgcgtggctctcaataatccaaaaacagttatcggtctggttgaagtaacaatcggtttg
cttccgggcgcggggggcacccagcggctcccccgtatgattggtattcaggccgcttta
ccgcttattctggaaggtcggaaagtgagcgttcaggaagccaaaaacctcggtatgatc
gacgacattgccgacacacccgacgagatgatggcccaagcccgcgcctggatcgacgcc
aacggaacgtctgccgggcaaaaacccctgaagccctgggacgagattgatcggaagacg
gggaagatcgttgggaaagacaactttaaggtgccgggcggcaacgtccaaagccccgtt
ggtgcccagacgtttgcggctggaacggccatgctcatggataaaaccaagggtaactac
cccgcccccctcgaaatcatggcttgtgtgtacgagggtctgcaagtcaatatcgaccgg
gcactaatgatcgaagcgcggcattttgtgaaggtggcgacctcaaaagtggcgaagaac
ctcatccagacgatgtttctgggtatgaacgaagccaacaagggagccagccgtccgaaa
gattacccaaaaactgacgtaaagaagctggggattctcggtgcgggcatgatgggcgcg
ggcatcgcttatgtatccgctcagaccggcattgaggttatcctgaaagacgtatcggtc
gaagcggccgaaaaaggcaaagactattcccgaaacctgcttaaaaaaggcgttgaacgc
ggcaaagtcgacccggcgaaagtagacggcatcctgaacctgatcaaacccactgccgat
gtgcaggacttgcagggttgcgacctcattattgaagccgtctttgaaaaccgggagttg
aaagcgcaggtaacccgggaagccgaacccatgctggcagagaacgggctgggtgtcttc
ggttccaacacttccaccctgcccattagcggactggcgcaggcatcgggcaagccggag
aactttattggcattcacttcttctcgcccgttgataagatgatgcttgtggagattatc
atgggccaacaaacgtcggattatgcgctggccgtcgccatcgatttcacccgcaagatt
cgaaaaacaccaatcgttgtcaatgatgcccgaggcttttacacctcccgctgtttcagt
acgtattcatcggaaggaatggaattactgaaagagggagtcaaccccattctgatcgag
aatgccggaaaagacgccggaatgcccgttggcccactcgccgttacggacgaagttgcc
ctggatctggtctataaaattaccggacagggaattaaagacggggccgttcgcgaagac
gacaccagttaccaggttgccaggacgttcgttgaactgggccgaaccggtaaaaaggcc
aaagccgggttttacgattatcaggatgaccgaagcaagaagttatggccgggtttgcag
gacctgttcccacaggccgagcagcagcctacactcgatgaagtaaaaacgcgtttgctc
taccggcaggccatcgaagctgtccgctgcttcgaagaaaacgtggtacggacaaagcta
gatgctgatctcggttccattctggcctggggtttcccggcttatacgggtggggccgta
tcgtttgtggatttcgtgggtgtcgatacgttcgttaaaacgctggaccgcctagccgat
cagtacggtgatcggttcctcccaacggcggccctgcgcgaacgggcacaagtataa
DBGET
integrated database retrieval system
