Spirosoma linguale: Slin_6568
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Entry
Slin_6568 CDS
T01156
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_6568
Transporters [BR:
sli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slin_6568
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_6
Motif
Other DBs
NCBI-GeneID:
8730354
NCBI-ProteinID:
ADB42525
UniProt:
D2QUP3
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All DBs
Position
7973179..7974687
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AA seq
502 aa
AA seq
DB search
MKRFILLALLTTASFSCRKEFIDLQPISEMNAGTFYKTEQDMNQAVMSPYASLRSLYNQP
FIYVSEIRSDNTTFSWVPGNSKDMTSIDNFGDVLLSDNGFVLTVWNNAYNTILRCNLVLD
KIDAVTFKDPKLKEQYKAEAKFIRSLMYFWLVRVYGDVPKVEKQLSVNEAYTLGRAPAQE
IYDLIVADLKFAEANLPASYAAVDKGRVTLGGAKGLLAKVYMTMAGYPLKKGAAYYALAE
TKALEVINNPQYSLVPDYKTLFDVTKKNSSESLFEVQYKKGGTSTGSPWNNDFAPRFSNK
EVVLVGDKSGFNAPTPSISNAYEAGDPRKAISMSDGYVSTATGKPVNEKYVKKYYDVSFS
GSDNDNNWIELRLADVYLLYAEALVRQGKQQDVALTYLNKIRQRARNSTGAGPGILPDYK
PFTTDADFLLAIEKERRVELAFENHRWFDLVRTERAKEVMTQEQKEQTGFNPTAWSDNML
LFPIPLQAIQANPEKIKQNPGY
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgatttatcctattggccctgcttaccacggcctctttttcctgccgaaaggag
tttattgatctccagcccatttcggaaatgaacgcggggacattttacaagaccgaacag
gacatgaaccaggcggtcatgtcgccgtatgcttccctgcggtctttgtataatcagccg
tttatctacgtgagcgaaatccgttcggacaataccaccttctcgtgggttccgggcaac
tccaaagacatgacctccatcgacaatttcggagacgtgctgctgtcggataacggcttt
gtgctgaccgtctggaacaacgcctacaacaccattctgcgctgcaacctcgtgctggac
aagatcgacgcggttacgttcaaagacccgaagctgaaagagcagtacaaagcggaggca
aaattcattcggtcactcatgtatttctggctggtacgcgtgtatggcgatgtgccaaaa
gtcgagaagcagttgtcggtaaacgaggcttatacgctgggccgggcaccagcacaggag
atttatgacctgattgtggccgatctgaaatttgccgaagccaacctgcccgcttcctac
gcagccgtcgataaagggcgcgtaacgctgggtggggctaaaggactgctcgccaaggtg
tacatgaccatggccgggtatccgctcaaaaaaggcgcggcttattacgccctggccgaa
acgaaagcgctggaagtgatcaacaacccgcagtattcgctcgtcccggattacaaaacg
ttgttcgacgtcaccaagaaaaacagctccgagtcgttgtttgaagtgcagtataaaaaa
ggcggcaccagcacgggcagcccctggaacaacgattttgcaccccggttctcgaacaag
gaagtcgttctggtgggcgataagagtggctttaatgccccaacgcccagcatatccaac
gcctacgaagccggtgacccgcgaaaagctatttccatgagcgacggctacgtgtctact
gcaacgggtaaacccgtcaacgagaagtacgtgaagaagtattacgacgtgtcgttcagc
ggttcggataatgataacaactggatcgaactgcgactggcggatgtctatttactgtac
gctgaagctctggttcggcagggtaaacaacaggatgtggcgctgacgtacctcaacaaa
atccgtcagcgggccagaaacagcactggcgctggaccgggtatattacccgattacaaa
ccttttacgactgatgccgactttctgctggctatcgagaaagaacggcgcgtcgaactg
gccttcgaaaaccatcggtggttcgatctggtcagaaccgaacgggccaaagaagtgatg
acgcaggagcaaaaagagcaaacgggcttcaacccgacggcctggagcgacaacatgctg
ctgttcccgattccgcttcaggccattcaggccaaccccgagaaaatcaagcagaacccc
ggctattaa
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