Spirosoma linguale: Slin_6639
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Entry
Slin_6639 CDS
T01156
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sli03000
]
Slin_6639
Transcription factors [BR:
sli03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Slin_6639
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
Peripla_BP_3
LacI
HTH_23
MarR_2
HTH_24
HTH_IclR
MarR
HTH_11
Fe_dep_repress
HTH_5
HTH_Tnp_ISL3
HTH_7
HTH_29
HTH_20
Sigma70_r4_2
HTH_28
HTH_38
HTH_AsnC-type
HTH_31
Sigma70_r4
VMAP-C
HTH_Crp_2
HTH_17
Sigma70_r3
HTH_3
HTH_10
Motif
Other DBs
NCBI-GeneID:
8730425
NCBI-ProteinID:
ADB42596
UniProt:
D2QUW4
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Position
8073915..8074928
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AA seq
337 aa
AA seq
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MKEAITIKEIARRLKISPSSVSRALQDSPRIGQKTRKAVQDLAAQLRYTPSQTARNLRRG
KTGVFAMVLPEIRENFFSEVVNGVEELAFLHQYSVALYQSHDLFEREQQILAMLTRTQVD
GVMLSVAKESRQFDHVQDLIDRGIPVVLFDRIPPNIDTHQVGCDMEKGAMEATRWLAGRG
FKRIALLNGPQPLVASEDRYRGYIKALLAENLPVENALVKRVDLSPEDTIQKMTQLLSAI
HPPDAVLAFNDYVALDAMQACRKNGLCINTDISFVSFANLPLTAYMDHSPLASVEQHPYQ
IGRKAVDILLSVLDIGDVESGFHRIMLEPELVVRVVS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagccattacgatcaaggaaattgcccgtcgattaaagatctccccgtccagt
gtgtcgcgggcacttcaggatagtccgcgcattgggcagaagacgcgtaaggcggtgcag
gacctggcggcccaactgcgctatacgcccagccagacggcccgtaatctgcgccggggt
aaaaccggcgtgtttgcgatggtgctgcccgaaatccgggaaaacttcttttcggaagtc
gtcaatggcgttgaagaactggcgtttctgcaccagtattcggtggccttgtatcaatca
cacgatctattcgaacgggagcagcagatactggccatgctgacccggactcaggtcgac
ggagtgatgctgtcggtggccaaagagtcgcggcagttcgaccatgtgcaggacctgatc
gaccgcggcattccggtggtgctattcgaccggattccacccaatatcgatacgcatcag
gtgggctgcgacatggagaaaggcgcgatggaagcgacccggtggctggccgggcgtggg
ttcaaacgaatagccctgctgaacggcccgcagccgctggtggccagcgaagatcggtac
agagggtacatcaaggcgttactagcggagaaccttccggtcgaaaatgcgctggtaaaa
cgggtcgacctgagtccggaagatactattcagaaaatgacgcagcttctaagcgccatc
cacccacccgatgctgtactggctttcaatgactatgtggccctggatgccatgcaggct
tgccggaaaaatgggttgtgcatcaataccgatatttcgtttgtgagcttcgccaacctt
ccgctaacggcctacatggatcattcgcccctggcatcggtcgagcagcatccgtatcag
attggccgcaaagccgtcgatattttactatccgttctcgatatcggcgatgtggagtcc
ggctttcatcggatcatgctcgaaccggaactggttgtccgggtggtttcgtag
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