Streptomyces liangshanensis: HA039_02340 Help Entry HA039_02340       CDS       T07519                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism slia  Streptomyces liangshanensis Pathway slia03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:slia00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     HA039_02340  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:slia03400]     HA039_02340 Enzymes [BR:slia01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      HA039_02340 DNA repair and recombination proteins [BR:slia03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      HA039_02340 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_primase_S AhtL-like_1st Motif Other DBs NCBI-ProteinID:  QIQ01289 UniProt:  A0A6G9GT91 LinkDB All DBs Position complement(521943..522902) Genome browser AA seq 319 aa AA seqDB search MDVVGVKGAGATDSGATDSVRAGNRTVPIHRPAKVLFPATGDDTGLTKADLVEYYRSVAP YMLPELKGRPLMLERHPDGLDGPRFMQKNTPDGYPEWVRRAELAKKGGTVTHPVCDNTAT LVFLADQACLTFHRWQSRADRPDAPDRLVFDLDPAEDTFEPVRRAATQLGELLGELRLPS ALLTTGSRGLHVIVPLDGRSGFDEVRAFAGDVARTLAARDPDHLTTEVRTGARGGRLYLD IQRNGYAQTAVAPFSVRAREGAPVATPISWDQLADPRVTARRWTVRDVLDQARTRPWSQV PARGRSLTPARKLLQSLKP NT seq 960 nt NT seq  +upstreamnt  +downstreamnt atggacgtggtcggggtgaagggcgccggggcgacggactcgggggcgacggattccgta cgggcggggaacaggaccgtaccgatccatcgcccggcgaaggtgctgttccccgccacc ggcgacgacacgggcctgacgaaggccgatctggtggagtactaccggtccgtcgcgccg tacatgctgccggagttgaagggcaggccgctcatgctggagcggcacccggacgggctc gacggcccccgcttcatgcagaagaacaccccggacggctatccggagtgggtgcgcagg gccgaactggccaagaagggcgggacggtcacccaccccgtctgcgacaacaccgccacc ctggtcttcctcgccgaccaggcgtgcctgaccttccaccgctggcagtcccgcgccgac cgtcccgacgcccccgaccggctggtcttcgacctcgacccggcggaggacaccttcgag cccgtccggcgcgcggccacccagctcggcgaactcctcggcgaactgcggctgcccagc gccctgttgacgaccggctcccgaggactgcacgtgatcgtcccgctggacggccgcagc ggcttcgacgaggtgcgcgccttcgccggcgacgtcgcccggacactggccgcccgcgac cccgaccacctgaccacggaggtacggaccggggcgcgcggcggccgcctgtacctggac atccagcgcaacggatacgcccagacggcggtggcgccgttctccgtacgggcgcgggag ggcgccccggtcgccacccccatcagctgggaccagctggcggacccgcgggtgacggcg aggcgctggacggtacgggacgtcctggaccaggcgaggacgcgcccgtggtcgcaggtc ccggcccgcggcaggtccctgaccccggcccgcaaactcctccagtccctgaagccctga

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