Streptomyces liangshanensis: HA039_05150
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Entry
HA039_05150 CDS
T07519
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
slia
Streptomyces liangshanensis
Brite
KEGG Orthology (KO) [BR:
slia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slia03021
]
HA039_05150
Transcription machinery [BR:
slia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HA039_05150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_10
HTH_37
HTH_3
HTH_23
DUF7343
IF2_N
MarR
HTH_31
KORA
Motif
Other DBs
NCBI-ProteinID:
QIQ01756
UniProt:
A0A6G9GUL0
LinkDB
All DBs
Position
1175900..1176769
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AA seq
289 aa
AA seq
DB search
MTTGTVRAVGVERTTERSEDVLPRIDDPSKVAPKDARALSKLFFDQLQVLEEGTHEYQYA
RNTLIEMNRSLVRFAAGRFRNRGGGDMEDIIQVGTIGLIKAIDRFDLSREVEFTSFAVPY
IVGEIKRFFRDTSWAVHVPRRLQELRVELAKAKEHLATSLDRDPTVKELAELLDIDEEEV
IEGLVATNGYTAGSLDMPTGDEGQSGSGRTFADVLGEPDPAMEKVENLHALAPLLEQLDE
RERSIVEMRFGREMTQSQIGTELGVSQMHVSRLLNRIISQLRAGMLVEE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccggaactgtgcgtgctgtcggggtggagaggacgaccgagcggtcggaggac
gtactgccgcggatcgacgaccccagcaaggtcgctcccaaggacgcccgcgcgttgtcc
aagctcttcttcgaccagctccaggttctggaagagggcacgcacgagtaccagtacgcg
cgtaacaccctcatcgagatgaaccgttcgctcgtccgcttcgccgcgggccgcttccgc
aaccggggcggcggcgacatggaggacatcatccaggtcggcacgatcggcctgatcaag
gcgatcgaccggttcgacctgtcccgcgaggtcgagttcacgtccttcgcggtgccgtac
atcgtgggcgagatcaagcggttcttccgtgacaccagctgggccgtgcacgtaccccgg
cgtctccaggagctgcgggtcgagctggcgaaggccaaggagcacctggccacgagcctg
gaccgggacccgacggtcaaggagctcgcggagctgctcgacatcgacgaggaagaggtc
atcgagggcctcgtcgcgacgaacggctacaccgccgggtcgctggacatgccgaccggt
gacgagggccagagcggcagcggccggaccttcgccgacgtgctgggcgagccggacccc
gcgatggagaaggtcgagaacctgcacgccctggcgccgctgctggagcagttggacgag
cgggagcgcagcatcgtggagatgcgcttcggccgggagatgacgcagtcgcagatcggt
acggagctgggcgtgtcccagatgcacgtgtcgcggctgctgaaccgcatcatctcgcag
ctccgcgcggggatgctcgtcgaggagtga
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