Streptomyces liangshanensis: HA039_08710
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Entry
HA039_08710 CDS
T07519
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slia
Streptomyces liangshanensis
Brite
KEGG Orthology (KO) [BR:
slia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slia03016
]
HA039_08710 (truB)
Enzymes [BR:
slia01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HA039_08710 (truB)
Transfer RNA biogenesis [BR:
slia03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HA039_08710 (truB)
Prokaryotic type
HA039_08710 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QIQ02379
UniProt:
A0A6G9GWF5
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All DBs
Position
complement(2077222..2078121)
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AA seq
299 aa
AA seq
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MTDQTTTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTIRLGQDTVTDDAEGEILTSTDASAVTREGIDAGVAALTGPLMQV
PSKVSAIKINGKRSYARVRGGEEFEIPARPVTVSSFKVYDVREAVADNGTPVVDLVVSVV
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYALDAARTLDQLQEELTVMPVADAAA
AAFPRWDVDERRARLLLNGVRLDIPEYGTGPVAVFGPGGGLLALVEDQQGKTKSLAVFG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccagaccaccacacccgacgggcttgtcatcgtggacaagccgtcgggtttc
acttcgcacgacgtcgtcgccaagatgcgggggatcgccaggacccgccgcgtcggccac
gccggcacgctcgaccccatggcgacgggcgtcctcgtcctcggcgtggaacgggccacg
aagctcctcggccacctcgcgctgaccgagaaggagtacctcggtacgatccggctcggc
caggacaccgtcaccgacgacgccgagggcgagatcctcacgtccaccgacgcgtcggcc
gtcacccgtgaggggatcgacgcgggggtcgcggccctcaccggacctctcatgcaggtg
ccgtccaaggtgagcgccatcaagatcaacggcaagcggtcgtacgcgcgcgtgcgcggc
ggcgaggagttcgagatcccggcccgcccggtgaccgtctcctcgttcaaggtgtacgac
gtgcgcgaggccgtcgccgacaacggcacccccgtcgtcgacctcgtcgtctccgtcgtc
tgctcctcggggacgtacatccgcgccctcgcccgcgacctgggcgcgggcctcggggtc
ggcggccacctcacggcgctgcgcaggacccgggtgggcccctacgcgctggacgcggcg
cggacgctggaccagctccaggaggagctgaccgtcatgcccgtcgcggacgcggcggcg
gcggcgttcccgcgctgggacgtggacgagcggcgtgcgcggctgctgctcaacggggtg
cggctggacataccggagtacgggacggggccggtcgcggtgttcgggcccggcgggggg
ctgctggcgctcgtggaggaccagcaggggaagacgaagagcctcgcggtcttcggctga
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