Streptomyces liangshanensis: HA039_09000
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Entry
HA039_09000 CDS
T07519
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
slia
Streptomyces liangshanensis
Pathway
slia02020
Two-component system
slia02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
slia00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HA039_09000 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HA039_09000 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slia03021
]
HA039_09000 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
slia02035
]
HA039_09000 (whiG)
Transcription machinery [BR:
slia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HA039_09000 (whiG)
Bacterial motility proteins [BR:
slia02035
]
Flagellar system
Flagellar assembly proteins
Stator
HA039_09000 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
UPF0122
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QIQ02431
UniProt:
A0A6G9GWQ3
LinkDB
All DBs
Position
complement(2144972..2145808)
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AA seq
278 aa
AA seq
DB search
MPQHTSGSDRAAAPPAARGAVRPPAPTSLDELWRSYKTTGDGRLREQLILHYSPLVKYVA
GRVSVGLPSNVEQADFVSSGVFGLIDAIEKFDIERSIKFETYAITRIRGAMIDELRALDW
IPRSVRQKARAVERAYATLEAQLRRTPSESEVAAEMGIALEELHAVFSQLSLANVVALEE
LLHVGGEGGDRLSLMDTLEDTAADNPVEVAEGRELRRLLARAINTLPDREKTVVTLYYYE
GLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLADVGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtctgaccgcgcggcggcgccccccgctgcccggggcgcc
gtgcggccccccgcgcccacgtctctcgacgagctgtggcggtcgtacaagaccacgggc
gacggccggctgcgggagcagttgatcctgcactactcaccgctggtgaagtacgtcgcg
ggccgggtgagcgtggggctgccgtccaacgtcgagcaagccgacttcgtctcctccggc
gtcttcggcctgatcgacgcgatcgagaagttcgacatcgagcggtcgatcaagttcgag
acctacgcgatcacccgcatccgcggcgcgatgatcgacgaactccgcgccctggactgg
atcccccgctccgtacgacagaaggcacgggccgtcgagcgcgcctacgccaccctggag
gcgcagctgcgccgcacgccctccgagagcgaggtcgccgccgagatggggatcgcgctg
gaggaactgcacgccgttttcagccagttgtcgttggcgaacgtggtggcgctggaggag
ctgctgcatgtcggcggcgagggcggcgaccggctcagcctgatggacaccctggaggac
accgccgccgacaacccggtggaggtcgccgaggggcgggagctgcggcggttgctcgcc
cgcgcgatcaacacgctccccgaccgggagaagacggtggtcacgctctactactacgag
gggctcacgctcgccgagatcgggaacgtcctgggtgtcacggagagccgggtcagccag
atccacaccaagtccgtgctgcaactgcgggcgaagctggccgacgtcggccgctga
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integrated database retrieval system
