Streptomyces liangshanensis: HA039_12845
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Entry
HA039_12845 CDS
T07519
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slia
Streptomyces liangshanensis
Pathway
slia03420
Nucleotide excision repair
slia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HA039_12845 (pcrA)
03430 Mismatch repair
HA039_12845 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slia03400
]
HA039_12845 (pcrA)
Enzymes [BR:
slia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HA039_12845 (pcrA)
DNA repair and recombination proteins [BR:
slia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HA039_12845 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HA039_12845 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIQ03094
UniProt:
A0A6G9GXZ9
LinkDB
All DBs
Position
complement(3013419..3015938)
Genome browser
AA seq
839 aa
AA seq
DB search
MSSLFDDSFLADLQPSGDEHPPPPEDQDREPPERIPDDLFGGVFDVPPPRDPYHRDGAPR
TVVDPAALLEGLNEEQRAAVVHTGSPLLIVAGAGSGKTRVLTHRIAHLLGTRSVHPGEIL
AITFTNKAAGEMKERVEQLVGPRARAMWVLTFHSACVRILRRESKKLGFTSSFSIYDAAD
SKRLMALVCRDLDLDPKRHPPKAFSAQVSNLKNELIDEETYADRAADGFEKTLAEAYRMY
QSRLREANALDFDDIIMTTVHLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLVRELV
GPSGEGDDPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDARTILLEQNYRSTQTILS
AANAVIERNESRRPKNLWTNAGAGALITGYVADTEHDEAQFVAEEIDRLTDAGDAKAGDV
AIFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDTVPLRRI
LNVPKRGIGDRAEAMIDALSLREKITFPQALRRVDEAYGMAARSSNAVKRFNTLMEELRT
VVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQERAQAEGA
AAAAADGTGGDGAAGAPAAPTTTGTLAEFLERVALVADSDQIPDEDVDGSGVITLMTLHT
AKGLEFPVVFLTGLEDGVFPHMRALGQVKELEEERRLAYVGITRARERLYLTRSSMRSAW
GQPAYNPPSRFLEEIPGQHLEWKRTGAQIPAGPTSGITSSLSSSAARSRSGGASGFATRR
TADKPVIALVVGDRVTHDQFGLGTVMAVTGTGADAQATVDFGDEKPKRLLLRYAPVEKL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctccagccctccggggacgagcac
ccgccgccgcccgaggaccaggaccgggagccgccggagcggatccccgacgacctcttc
ggaggtgtattcgacgtgccaccgccccgcgatccgtaccaccgtgacggcgccccgcgc
acggtcgtggacccggccgcgctgctcgaagggctcaacgaggagcagcgcgcggccgtc
gtccacaccggctcgcccctgctcatcgtggccggcgccgggtcgggcaagacccgcgtc
ctgacccaccggatcgcgcacctgctgggcacccgcagcgtgcaccccggcgagatactg
gccatcacgttcacgaacaaggccgcgggcgagatgaaggagcgggtcgagcagctcgtc
ggcccccgggcgcgggccatgtgggtgctgaccttccacagcgcgtgtgtacggatcctg
cgccgcgagtccaagaagctcgggttcacctcgtccttctcgatctacgacgcggccgac
tccaagcgcctgatggcgctcgtctgccgcgatctggacctggaccccaagcggcacccc
ccgaaggcgttcagcgcccaggtatcgaacctgaagaacgagctgatcgacgaggagacg
tacgccgaccgggccgccgacggcttcgagaagacgctcgccgaggcctaccggatgtac
cagtcgcgcctgcgcgaggccaacgcgctggacttcgacgacatcatcatgaccaccgtc
cacctgctccaggcgttcccggacgtcgccgagcactaccggcggcgcttccggcacgtc
ctggtggacgagtaccaggacacgaaccacgcgcagtacaccctcgtacgggagctggtg
ggcccctccggggagggcgacgacccggccgagctgtgtgtggtcggtgacgccgaccag
tccatctacgccttccggggcgccacgatccgtaacatcctccagttcgaggaggactac
ccggacgcgcgcacgatcctgctggagcagaactaccgctcgacgcagacgatcctcagc
gcggccaacgcggtcatcgagcgcaacgagagccgccggcccaagaacctgtggacgaac
gcgggcgcgggcgccctgatcacgggctatgtcgccgacaccgagcacgacgaggcgcag
ttcgtcgccgaggagatcgaccggctgacggacgcgggcgacgccaaggcgggcgacgtc
gcgatcttctaccggacgaacgcgcagtcgcgtgtcttcgaggagatcttcatccgggtc
ggcctgccctacaaggtcgtcggcggggtgcggttctacgagcgcaaggaggtccgcgac
gtgctggcctacctgcgcgtgctggccaaccccgaggacacggtcccgctgcgccggatc
ctcaacgtgcccaagcgcggcatcggggaccgcgcggaggcgatgatcgacgcgctctcg
ctgcgggagaagatcaccttcccgcaggcgctgcggcgcgtggacgaggcgtacggcatg
gcggcccgctcgtcgaacgcggtcaagcgcttcaacacgctgatggaggagctccgtacg
gtcgtggagtccggcgcgggacccgcgacggtcctggaggccgtgctcgaacggaccggc
tacctggcggagttgcaggcctcgaccgacccccaggacgagacccggatcgagaacctg
caggaattggccgcggtggccctggagttcgagcaggagcgcgcgcaggccgaaggcgcg
gcggcggccgccgctgacggaacaggcggtgacggggcggccggcgcgcccgccgccccg
accaccaccggcacgctcgccgagttcctggagcgggtggcgctggtcgccgactctgac
cagatccccgacgaggacgtggacggctccggtgtcatcacgctgatgacgctgcacacc
gccaagggcctggagttccccgtggtgttcctgacgggcctggaggacggcgtgttcccg
cacatgcgcgccctcggccaggtcaaggagctggaggaggagcgccgactcgcgtacgtg
ggcatcacccgcgcccgcgagcgcctctacctgacccgctcctccatgcggagcgcctgg
ggacagcccgcgtacaacccgccgtcgcggttcctggaggagatcccgggacagcacctg
gagtggaagcggacgggcgcgcagatcccggcgggccccacgtccgggatcacgtcctcg
ctgtcgtcgagcgccgcgcgctcgcggtcgggcggcgcgtcgggcttcgccacgcggcgt
acggccgacaagccggtcatcgccctggtggtgggggaccgggtgacgcacgaccagttc
gggctcggcacggtcatggccgtgacgggcacgggcgcggacgcgcaggcgacggtggac
ttcggggacgagaagcccaagcggctgctgctgcggtacgcgccggtcgagaagctgtag
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