Streptomyces liangshanensis: HA039_15910
Help
Entry
HA039_15910 CDS
T07519
Name
(GenBank) type IV secretion protein Rhs
Organism
slia
Streptomyces liangshanensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
T7SS_signal
DUF6531
TEN_YD-shell
DUF4595
Tox-HNH-EHHH
RHS
OCRE
Motif
Other DBs
NCBI-ProteinID:
QIQ03617
UniProt:
A0A6G9H0G3
LinkDB
All DBs
Position
3692245..3697068
Genome browser
AA seq
1607 aa
AA seq
DB search
MGIGDFISDITPDVVEDAVEDGVEWAGNRVEDAGNWTADRLDDAGWESGADWVREKSRSV
ANRMGAEVDELDLGQTEDKTKLIYGSPSELRATASHLKDFQNAFDNVGKGLGGLDSASLK
GQAADAFRATVAIEPPKWFRGADAFEKAGAALEAFAGTVEWAQGQAQSAIDKWKAGTKAS
QEARDAYNGKVDAYNKAADAYNAKPADQRDPAALPPKPGEFSDPGTARMKEAQELLAEAR
RQRNTAAETARAAVRAARDTAPPKPSYAQQATDGLNELNVMQTHFGGGIVKGTAGLLTFA
RSINPTDPYNITHPAEYALSLNNTVAGLVQVANDPWGAGKQMVTDFMKDPAEGLGRLVPD
LVMTAATGGAGAGVKGARVAKEAADLAADANRARKLLDDAPEGTHNRPDGERTTTGTDPV
DLASGRMYLPQTDVVLPGILPLVFTRRVESGYRAGRFFGPSWSSTADERLEIDATGVVHV
TDDGLLITYPHPVPGLPTNPESGTHRTTLARDESGDYTLTDPDTRLIRHFTAPPGTEPGG
DGDAWLAQVTDRNHHTITVDRTDDGTPQALVHSAGHHLALTVTDGRITTLTLAGADGEPP
RPLMAYGYTDGNLTTVTKPSGATLTFTYDHHRRVTAWIDSNNRRYDYAYDDQDRCVAEGG
EAGHVQLTLTYTDPDPDTGHRVTTLTTAAGHTTHHLVGPGNHILATTDPLGHTTRHTYDT
RGNPLTHTDPLGRTTHLTYDNNNRLTTITRPDGSEVRAVRDTLGRLTEFTGPDGTHRQQE
FDDRGNRVAVTDPAGHTTRFAYDAHGRLVAVTDALGAVTTVRSDPAGLPLEVTDPLGGTT
RYDRDTFGRPVRVTDPLGAVTLLEWTADGQLARRTGPDGGTESWTYDGEGNRTSHTDPLG
QVTSFTYTHFDLPAARTGPDGAHYAFAHDAELRLTQVTNPQGLTWSYAYDAAGRLISETD
FDGRVRTYSRDPAGQITVRTNALGEAITLERDPLGRVTAKDVAGEVTTYAYDSGGRMIRA
SGPDSELIYQYDRRGQIKTELADGRTTTYAYDALGRRARRTTPSGRVTTYGYDAAGRPTH
LTAAGHRVSFVHDRAGRETERIFGDTLTLASGHDAAGRLSTQRLAAGGRVLNDRVYTYRA
DGHVTSLDDTLRGFQRFDLDAAGRVTEVTAADWTESYAYDVAGNQTSATWPEGRSDGGAS
GARVHAGTRMLRAGANSYTYDGAGRLVARTKTRLSRKADTWRYSYNADDQLTAVTTPDGT
RWRYRYDPLGRRVSKERMAADGTGGGGTGADGTGIDGTGVAERITFTWDGTVLAEQTTSH
PERLPHPVTLTWDHRGLTPLAQTERLTDETTQREIDSRFFAIATDLIGTPTELVGESGDI
AWRTRTTLWGNTTWNADATTYTPLRFPGQYYDPETGLHYNHHRYYDPRTARYTTPDPLGL
APAPNPAVYVHNPLTWADPLGLTPYPPKGEHSNPFGHRTDAERAAFEAAGVPYGETPIAE
WTVTGDKSLKHVPGYTYSSEATHWGNFRQFETDQGSRVIVEHTHDPAGQHFHAGKPKIDD
SRELVNFGWDNGRVQRGDGSFGYPEDMERYGKINKPGGDHHFFYVEK
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
gtgggtatcggtgacttcatcagtgacatcacgcccgatgtggtggaggacgcggtcgag
gacggtgtcgagtgggcgggcaaccgggtcgaggacgcggggaactggaccgcggaccgg
ttggacgacgccggctgggagtcgggtgccgactgggtgcgggagaagtcccggtcggtg
gcgaaccggatgggcgccgaggtcgacgagctggacctcgggcagaccgaggacaagacg
aagctgatctacggttcgccctcggagttgcgggcgaccgcctcccatctcaaggacttc
cagaacgcgttcgacaacgtgggcaagggactgggcggtctggattcggcgtcgctgaag
gggcaggcggcggacgcgttccgggcgacggtggcgatcgagccgccgaagtggttcagg
ggcgcggacgcgttcgagaaggccggggccgcgttggaggcgttcgccgggaccgtggag
tgggcgcaggggcaggcgcagagcgcgatcgacaagtggaaggccgggacgaaggcctca
caggaggcgcgggacgcgtacaacgggaaggtcgacgcctacaacaaggcggctgacgcg
tacaacgcgaagccggccgatcagcgcgacccggccgccctgccgccgaagccgggggag
ttcagcgatccgggtacggcgcggatgaaggaggcgcaggagctgctggccgaggcgcgg
cgccagcgcaacacggcggctgagacggcgcgtgccgctgtgcgggcggcccgtgacacg
gcgccgccgaagccctcgtacgcccagcaggcgacggacgggctgaacgaactgaacgtc
atgcagacccacttcggtggtggcatcgtcaagggcacggccgggctgctgaccttcgcc
cggagtatcaacccgaccgatccgtacaacatcacgcatcccgccgagtacgccctgagc
ctgaacaacaccgtcgccgggctcgtccaggtcgccaacgacccctggggcgcgggcaag
cagatggtcaccgacttcatgaaggaccccgccgaaggcctcggccggctcgtacccgac
ctcgtgatgaccgccgccaccggcggtgcgggcgcgggcgtcaagggggcgcgggtcgcg
aaggaggccgccgatctcgccgcggacgccaaccgggcgcgcaagctcctcgacgacgcc
cccgagggcacccacaaccggcccgacggggaacgcaccaccaccggcaccgaccccgtc
gacctcgcctccggccgcatgtacctcccgcagacggacgtggtcctgccgggcatcctg
cccctggtcttcacgcgccgcgtcgagtccggttaccgggcgggccgcttcttcgggccc
tcctggtcctcgactgccgacgagcgcctggagatcgacgccactggggtcgtccacgtc
accgacgacggcctcctcatcacctacccccaccccgttccgggcctgcccacgaacccg
gagtccggcacccaccgcaccaccctggcccgcgacgagagcggtgactacaccctcacc
gaccccgacacccgcctgatccgccacttcaccgcaccacccggtaccgaacccggcggg
gacggcgacgcctggctcgcccaggtcaccgaccgcaaccaccacaccatcaccgtcgac
cgcaccgacgacggcaccccccaggccctcgtccactccgccggccaccacctggcactg
accgtgaccgacggccgcatcactaccctcaccctggccggagcggacggggagccgccg
cgccccctgatggcgtacggctacacggacggcaacctgaccaccgtcaccaagccctcc
ggcgccaccctcaccttcacctacgaccaccaccgccgcgtcaccgcctggatcgactcc
aacaaccgccgctacgactacgcctacgacgaccaggaccggtgcgtcgccgaaggcggc
gaggccggacacgtccaactcaccctcacctacaccgatccggaccccgacaccggacac
cgcgtcaccaccctcaccaccgccgccggccacaccacccaccacctcgtcggtcccggc
aaccacatcctcgccaccaccgaccccctcggccacaccacccgccacacctacgacacc
cgcggcaaccccctcacccacaccgaccccctcggccgcaccacccacctcacctacgac
aacaacaacagactcaccaccatcacccgccccgacggcagcgaagtacgcgccgtccgg
gacacgttgggccggctgaccgagttcaccggcccggacggcacacaccggcagcaggag
ttcgacgaccgcggcaaccgggtggccgtgaccgaccccgccggacacaccacacgtttc
gcgtacgacgcacacggccggctggtcgcggtcaccgacgcgctcggggccgtcaccacc
gtgcggtccgacccggccgggctgccgctggaggtcaccgatccgctgggcggcaccacc
cgctacgaccgcgacaccttcggccgccccgtgcgcgtcacggacccgctgggagcggtg
acgctcctggagtggaccgccgacggccaactcgcccgccgtaccggcccggacggcggc
accgagtcatggacgtacgacggcgaggggaaccgcaccagccacaccgaccccctgggc
caggtcacctccttcacctacacccatttcgacctgccggcggcacgcaccggcccggac
ggcgcccactacgcgttcgcccacgacgcggaactgcgcctgacccaggtcaccaatccc
cagggcctgacctggtcctacgcctacgacgcggccggccggctcatctccgagacggac
ttcgacggccgcgtccgcacctactcgcgcgacccggcgggacagatcacggtccgtacg
aacgccctcggcgaggccatcaccctggaacgggatccgctcggccgcgtgaccgccaag
gacgtcgcgggcgaggtgaccacgtacgcgtacgacagcggcgggcgcatgatccgggcc
agcgggccggacagcgaactgatctaccagtacgaccgccgcggccagatcaagacggaa
ctcgccgacgggcgcaccaccacctacgcctacgacgccctcggccgccgcgcccggcgc
accacacccagcggccgcgtcaccacgtacgggtacgacgcggcgggccgccccacccac
ctgaccgccgccggccaccgcgtctccttcgtccacgacagggccggccgggagaccgag
cggatcttcggtgacaccctgaccctggcgtccggccacgacgcggcgggccgcctcagc
acgcagcgcctcgcggccggcggccgggtcctcaacgaccgcgtctacacctaccgcgcc
gacggtcacgtcacctccctggacgacaccctgcgcggtttccagcgcttcgacctcgac
gcggccggccgggtcacggaggtcacggcggccgactggacggagtcgtacgcctacgac
gtggcgggcaaccagacctccgccacctggcccgagggccgctcggacggcggggcgagc
ggcgcccgtgtccacgccggcacccggatgctgcgcgcgggcgccaacagctacacgtac
gacggggcggggcgcctggtggcgcgtaccaagacgcgtctgtcgaggaaggcggacacc
tggcgttactcctacaacgccgacgaccagctcaccgcggtcacgactcccgacggcacg
cgctggcgctaccggtacgacccgctgggccgccgcgtctcgaaggagcggatggccgca
gacggtacggggggcggcggtacgggcgccgatggcacggggatcgacggtacgggcgtc
gcggaacggatcacgttcacctgggacggcaccgtcctggcggaacagaccaccagccac
ccggagcggctgccccatcccgtcacgctgacctgggaccaccgcggcctcaccccgctc
gcccagaccgaacgcctcaccgacgagaccacccagcgcgagatcgacagccgcttcttc
gccatcgccaccgacctgatcggcaccccgaccgaactcgtcggcgagtccggcgacatc
gcgtggcggacgcgcaccacgctgtggggcaacaccacctggaacgcggacgccaccacg
tacaccccgctccgcttccccgggcagtactacgaccccgagaccggtctccactacaac
caccaccgctactacgacccgcggacggcccgctacacgacacctgatccgctggggctc
gcgcccgccccgaatccggccgtctacgtgcacaatccgctcacctgggccgatcccctc
gggctcacgccgtacccgcccaagggcgagcactccaatccgttcggccaccggaccgac
gccgagagagccgcgttcgaagcggcgggggtgccgtacggcgagacaccgatcgccgag
tggacggtgaccggcgacaagagcctgaaacacgtgccgggatacacgtattcgagcgag
gcgacccactgggggaacttccgccagttcgagacggaccagggatcccgggtgatcgtg
gagcacacgcacgatccggcgggtcagcacttccacgcggggaagcccaagatcgacgat
tcccgggagctggtcaacttcggctgggacaacggccgggtgcaacgcggggacggctct
ttcgggtatccggaggacatggaaagatacggcaagatcaacaaaccgggcggggaccac
cacttcttctacgtggagaaatga
DBGET
integrated database retrieval system
