Streptomyces liangshanensis: HA039_23685
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Entry
HA039_23685 CDS
T07519
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
slia
Streptomyces liangshanensis
Pathway
slia03030
DNA replication
slia03430
Mismatch repair
slia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HA039_23685 (holA)
03430 Mismatch repair
HA039_23685 (holA)
03440 Homologous recombination
HA039_23685 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slia03032
]
HA039_23685 (holA)
03400 DNA repair and recombination proteins [BR:
slia03400
]
HA039_23685 (holA)
Enzymes [BR:
slia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HA039_23685 (holA)
DNA replication proteins [BR:
slia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HA039_23685 (holA)
DNA repair and recombination proteins [BR:
slia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HA039_23685 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QIQ04879
UniProt:
A0A6G9H3L1
LinkDB
All DBs
Position
5464511..5465497
Genome browser
AA seq
328 aa
AA seq
DB search
MATRKASPDDLLAPLTLAVGQEDLLLDRAVQQVVAAARASDADTDVRDLTSDQLQPGTLA
ELTSPSLFAERKVVIVRNAQDLSADTIKDVKAYLDAPAEEITLVLLHAGGAKGKALLDAA
RKAGAREVACPKTTKPAERLSFVRSEFRVLGRSATPEACQALVDSIGSDLRELASAVSQL
AADVEGTIDEEIVARYYTGRAEASSFTVADRAVEGRAAEALEALRWSLSTGVAPVLITSA
LAQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVAAALVAVAEADA
GVKGGGDDPEYALEKAVVAIARAARAGR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagaaaagcttcccccgacgacctgctcgccccgctcacgctcgccgtgggt
caggaggacctgctgctcgaccgtgccgtgcagcaggtcgtggcggcggcccgcgcctcc
gacgccgacacggacgtccgtgatctcacctccgaccagctccagcccggcacgctcgcc
gagctgaccagcccgtcgctcttcgcggagcgcaaggtcgtcatcgtgcggaacgcgcag
gatctctcggccgacacgatcaaggacgtcaaggcgtacctcgacgcgcccgccgaggag
atcacgctcgtcctgctgcacgcgggcggggccaagggcaaggcgctgctggacgcggcg
cgcaaggcgggtgcgcgggaggtcgcgtgccccaagaccacgaagccggcggagcgcctg
agcttcgtacggtccgagttccgcgtgctgggccgttcggccacgcccgaggcgtgccag
gccctcgtcgactcgatcggcagcgatctgcgggagctggcgagcgcggtctcgcagctc
gcggcggacgtggagggcacgatcgacgaggagatcgtcgcccgctactacacgggccgt
gcggaggcctcctccttcacggtcgcggaccgtgccgtggaggggcgtgcggccgaggcg
ctggaggcgttgcggtggtcgttgtcgacgggggtggcgcccgtgctgatcaccagcgcg
ctcgcccagggcgtccgggccatcgggaagctctcgtcggcccggggggggcggcccgcc
gacctcgcgcgtgagctggggatgccgccgtggaagatcgatcgggttcggcagcagatg
cgtggatggaccccggacggggtggcggcggcgctggtggcggtggccgaggcggatgcg
ggggtgaaggggggtggggatgacccggagtacgcgttggagaaggcggtcgtcgcgatt
gccagggctgcgcgggccggtaggtag
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