Streptomyces liangshanensis: HA039_25735
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Entry
HA039_25735 CDS
T07519
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
slia
Streptomyces liangshanensis
Pathway
slia03030
DNA replication
slia03430
Mismatch repair
slia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HA039_25735 (dnaE)
03430 Mismatch repair
HA039_25735 (dnaE)
03440 Homologous recombination
HA039_25735 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slia03032
]
HA039_25735 (dnaE)
03400 DNA repair and recombination proteins [BR:
slia03400
]
HA039_25735 (dnaE)
Enzymes [BR:
slia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HA039_25735 (dnaE)
DNA replication proteins [BR:
slia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HA039_25735 (dnaE)
DNA repair and recombination proteins [BR:
slia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HA039_25735 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
QIQ05229
UniProt:
A0A6G9H4L7
LinkDB
All DBs
Position
5930085..5933624
Genome browser
AA seq
1179 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLGDMFKACGEMGMSHIAMTDHGNLHGAYDFFHQAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANAKGLHNLFRL
SSDAYAEGWLTKWPRMDKETIAQWSEGLIASTGCPSGEVQTRLRLGQFDDALKAASEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGQKLGIPPLVTNDSHYTYANEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAVDSSDAWQEGCANTLLVAQQIDTEGMFQERN
LMPKFDIPEGFTEVSWFREETMRGMARRYPGGIPDDRLKQVEYEMGIIIDMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVSYAMGITDLDPIEHGLIFERFLNPERISMPDVDI
DFDERRRGEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPKHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGIDLDLLALPLTDPTTYELLCRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNGQQEITPIHPELEEPLKEILGLTHGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKADELAKNFVLFQAGAKKNGYSDEAIQALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
QSNFAAQGDDVILFGLTAIRNVGQNVVDSIIRCRKAKGKYTSFPDFLDKVEVVVCNKRTV
ESLIKAGAFDEMKHTRKGLVAHHEPMIDNVVAVKRKEAEGQFDLFGGMGDEATDEPGFGL
DVEFSDVEWDKSYLLAQEREMLGLYVSDHPLFGLEHVLSDKSDAAISQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRL
DKREDIPRLVAMELQVPDVSSAGTDAPVVITIPTVKVTPPMISRLGEILGHHRGNSEVRI
KLQGARKTTVLRLDRHRVQPDAALFGDLKVLLGPACLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgcccttcacgcacctgcatgtccacacccagtactccctgctggacggt
gccgcgcggctcggcgacatgttcaaggcctgcggtgagatgggcatgtcccacatcgcc
atgacggaccacgggaacctgcacggggcctacgacttcttccaccaggcgaagaaggcc
ggcgtcaccccgatcatcgggatcgaggcgtacgtcgcccccgagtcacggcgcaacaag
cggaagatccagtggggccagccgcaccagaagcgtgacgacgtgtccggttccggtggg
tacacccacaagacgatctgggcggcgaacgcgaaggggctgcacaacctcttccgcctc
tcctccgacgcgtacgccgagggctggctgacgaagtggccgcggatggacaaggagacc
atcgcccagtggtccgagggcctgatcgcctccaccggctgcccctccggcgaggtccag
acccggctgcgcctcggccagttcgacgacgcgctcaaggcggcctccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctcatggaccacggcatcgagatcgaacgg
cgggtcagggacggcctgctggagatcggccagaagctgggcatcccgccgctggtcacc
aacgactcgcactacacgtacgcgaacgaggccaccgcccacgacgcgctgctctgcatc
cagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcaccggctactac
ctcaagtccacggacgagatgtacgcggtggactcctccgacgcctggcaggagggctgc
gccaacaccctgctggtggcgcagcagatcgacaccgagggcatgttccaggagcggaac
ctgatgcccaagttcgacatccccgagggcttcaccgaggtcagctggttccgcgaggag
accatgcgcggcatggcccgccgctacccgggcggcatcccggacgaccggctcaagcag
gtcgagtacgagatgggcatcatcatcgacatgggcttccccgggtacttcctggtggtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtgggcccgggccgcggctcg
gcggccggttcgatcgtctcgtacgcgatgggcatcaccgacctcgacccgatcgagcac
gggctgatcttcgagcggttcctcaaccccgagcgcatctcgatgcccgacgtcgacatc
gacttcgacgagcgccggcgcggcgaggtcatccggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacgtacggcaagatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtcctcggctacccgtacgcgatgggcgaccgcctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgaccccaagcacccgcgc
tacagcgaggcgggcgagatccgggggatgtacgagaacgaaccggacgtcaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgcggccggc
gtcatcatgtccagcgagccgatcgtcgaccacgccccgatctgggtccggcacaccgac
ggggtgaccatcacccagtgggactacccccagtgcgagtcgctcggcctgctcaagatg
gacttcctggggctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaaggcc
aacaagggcatcgacctcgacctgctcgcgctgccgctgaccgaccccaccacgtacgaa
ctgctctgccgcggtgacaccctcggcgtcttccagttcgacggcgggcccatgcgctcc
ctgctgcgcctgatgaagcccgacaacttcgaggacatttccgccgtctcggccctctac
cggccgggcccgatgggcatgaactcgcacacgaactacgcgctgcgcaagaacggccag
caggagatcaccccgatccacccggagctggaggagccgctcaaggagatcctcggcctc
acccacggcctgatcgtgtaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactccctgggcgaggccgacatcctgcgccgcgtgatgggcaagaagaaggccgacgag
ctggcgaagaacttcgtcctcttccaggccggcgccaagaagaacggctactcggacgag
gcgatccaggccctgtgggacgtcctggtgccgttcgccggatacgccttcaacaaggcc
cactcctccgcgtacggcctggtcacctactggaccgcgtacctgaaggcgaactacccc
gccgagtacatggcggccctgctgacctcggtgaaggacgacaaggacaagtcggccgtc
tacctcaacgagtgccggcgcatgggcatcaaggtgctcccgccgaacgtcaacgagtcg
cagtcgaacttcgccgcccagggtgacgacgtgatcctcttcggcctgaccgcgatcagg
aacgtggggcagaacgtcgtcgactcgatcatccggtgccgcaaggcgaaggggaagtac
accagcttccccgacttcctggacaaggtcgaggtcgtcgtctgcaacaagcgcaccgtc
gagtcgctgatcaaggccggcgccttcgacgagatgaagcacacccgcaaggggctcgtc
gcccaccacgaaccgatgatcgacaacgtggtcgcggtgaagcgcaaggaggccgagggg
cagttcgacctcttcggcgggatgggcgacgaggccaccgacgagcccggcttcggcctc
gacgtcgagttctccgacgtcgagtgggataagtcgtacctcctcgcgcaggagcgggag
atgctcggcctgtacgtctccgaccacccgctcttcggtctcgaacacgtgctgtccgac
aagtccgacgcggcgatctcccagctcaccgggggtgagcacgcggacggcgcggtcgtc
accatcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtcgaggacctggccgggtccatcgagtgcatgttcttccccgccacc
taccagctggtctccacccagctcgtcgaggacaccgtggtcttcgtcaagggccgcctc
gacaagcgcgaggacatcccccggctggtcgccatggagctccaggtgcccgacgtgtcg
tccgccggcacggacgcgcccgtcgtcatcacgatccccacggtgaaggtcaccccgccg
atgatcagccgcctcggcgagatcctcggccaccaccggggcaactccgaggtccggatc
aagctccagggggccaggaagacgacggtcctgaggctcgaccggcaccgggtccagccg
gacgcggcgctcttcggcgacctcaaggtgctgctgggcccggcctgcctggccggctga
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