Streptomyces liangshanensis: HA039_28005
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Entry
HA039_28005 CDS
T07519
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
slia
Streptomyces liangshanensis
Brite
KEGG Orthology (KO) [BR:
slia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slia03019
]
HA039_28005
Enzymes [BR:
slia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HA039_28005
Messenger RNA biogenesis [BR:
slia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HA039_28005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QIQ05629
UniProt:
A0A6G9H5T7
LinkDB
All DBs
Position
6461147..6463975
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AA seq
942 aa
AA seq
DB search
MTEDLSPAERYAASRIRAAEQATALAPFREMYDFGLDPFQIEACEALEAGKGVLVAAPTG
SGKTIVGEFAVHLALAEGRKCFYTTPIKALSNQKYADLCKRYGADKVGLLTGDNSVNSDA
PVVVMTTEVLRNMLYAGSQSLLGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTQVIVSEHRPVPLWQHVMAGRRMYDLFEEESDHGGRGVAK
RETNPDLVRLARMENQRTYNPRDRRRGKMVREADRERERRQRSRIWTPSRPEVIERLAAE
GLLPAITFIFSRAACEAAVQQCMFAGLRLNNDEQRQRVREIVEERTASIPGEDLHVLGYY
EWLEGLERGIAAHHAGMLPTFKEVVEELFVKGLVKAVFATETLALGINMPARSVVLEKLV
KWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGMDPGALAGLAGTRTYPLRSS
FRPSYNMAVNLTQQFGRHRSRELLETSFAQFQADKSVVGISRQVQKNEEGLDGYKAGMTC
HLGDFEEYARLRRDLKDRETDLAKQGAAQRRAAAASSLERLKPGDVIHVPTGKFAGLALV
LDPGVPAGRSNGHRGMEYQDGPRPLVLTAERQVKRLASMDFPVPVEVLERMRIPKSFNAR
APQSRRDLASALRSKAGHIVPERHRRERAAAADDREIARLRTELRAHPCHGCDEREDHAR
WAERYHRLQRDTRQLENRIEGRTNTIARTFDRIVALLTELDYLRGDEVTQHGKRLARLYG
ELDLLASECLREGVWEGLGPAELAACVSALVYESRQADDAGPPKVPAGDAKAALGEMVRI
WGRLDALEEDFKINQAEGVGQREPDLGFAWAVHRWASGKGLDEVLRDAEMPAGDFVRWCK
QVIDVLGQVAAAAPRENSTVAKNARKAVDAVLRGVVAYSSVG
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggacctctccccagccgagcggtacgccgcttcccggatccgcgccgccgag
caggccacggcgctcgcccccttccgtgagatgtacgacttcgggctggacccgttccag
atcgaggcctgcgaggcactggaagccggaaagggcgtgctcgtcgcggcgcccaccggg
tcgggcaagaccatcgtcggcgagttcgccgtccacctggccctggccgagggccgcaag
tgtttctacaccacgccgatcaaggcgctgtccaaccagaagtacgccgacctgtgcaag
cgctacggcgccgacaaggtgggcctgctgaccggggacaacagcgtcaattcggacgcg
cccgtggtcgtgatgaccacggaagtcctgcggaacatgctgtacgcgggctcgcagtcg
ctgctcggcctcggctatgtcgtgatggacgaggtgcactacctctccgaccgcttccgg
ggcgccgtctgggaagaggtgatcatccacctccccgagtcggtcacgctggtctcgctg
tcggcgacggtgtcgaacgcggaggagttcggcgactggctggacaccgtccgcggcgac
acccaggtgatcgtctccgagcaccgccccgtgccgctgtggcagcacgtgatggccggc
cgccggatgtacgacctgttcgaggaggagagcgaccacggcggccggggcgtcgccaag
cgggagaccaaccccgacctggtccggctggcccggatggagaaccagcggacgtacaac
ccgcgcgaccgccgccgtggcaagatggtccgcgaggccgaccgggagcgcgagcgcaga
cagcgcagccggatctggacgccctcacggcccgaggtcatcgagcggctggcggccgag
ggcctgctccccgcgatcacgttcatcttcagccgcgccgcgtgcgaggccgccgtacag
cagtgcatgttcgccgggctgcggctcaacaacgacgagcagcggcagcgggtccgcgag
atcgtcgaggagcgcacggcctccatcccgggcgaggacctgcacgtcctcgggtactac
gagtggctggagggcctggagcggggcatcgccgcccaccacgcgggcatgctgccgacc
ttcaaggaggtcgtcgaggagctgttcgtgaagggcctggtcaaggcggtcttcgccacc
gagacgctggccctgggcatcaacatgcccgcgcggtccgtggtcctggagaagctcgtc
aagtggaacggcgagcagcacgccgacatcacccccggcgagtacacccagctgaccggc
cgcgccgggcggcggggcatcgacgtcgagggccacgccgtggtgctctggcagcgcggc
atggacccgggcgcgctcgccggcctggccgggaccaggacgtatccgctgcgctccagc
ttccgcccgtcgtacaacatggcggtgaacctcacccagcagttcggcaggcaccgctcg
cgcgagctgctggagacgtccttcgcgcagttccaggccgacaagtcggtcgtcgggatc
tcccggcaggtgcagaagaacgaggagggactcgacggctacaaggcgggcatgacctgc
cacctcggggacttcgaggagtacgctcggctgcgccgcgacctcaaggaccgcgagacg
gacctcgccaagcagggcgccgcccagcgcagggccgccgccgcgtcctcgctggagcgg
ctcaagcccggcgatgtcatccacgtgccgacggggaagttcgccggcctcgcgctggtc
ctcgacccgggcgtgccggccgggcggtccaacggccaccgcgggatggagtaccaggac
gggccgcgcccgctggtcctcaccgccgagcggcaggtcaagcggctggcgtcgatggac
ttcccggtgcccgtggaggtgctggagcggatgcggatcccgaagtcgttcaacgcgcgc
gccccgcagtcccgccgtgacctcgcctccgcgctgcgctcgaaggccggtcacatcgtg
cccgagcggcaccgcagggagcgggccgccgccgcggacgaccgggagatcgcccggctc
cgcacggagctgcgcgcccacccgtgccacgggtgcgacgagcgggaggaccacgcgcgc
tgggccgagcggtaccaccggctccagcgggacacccgccagctggagaaccggatcgag
ggccgcaccaacaccatcgcccggacgttcgaccggatcgtggcgctcctcaccgagctg
gactacctgcgcggcgacgaggtcacgcagcacggcaagcggctggccaggctctacggc
gagctggacctcctcgcgagcgaatgcctgcgggaaggcgtctgggagggcctcggcccg
gccgagctggcggcgtgcgtctcggcgctggtgtacgagtcgcggcaggccgacgacgcg
gggccgcccaaggtcccggcgggcgacgcgaaggcggcgctcggcgagatggtccgcatc
tgggggcggctcgacgccctggaggaggacttcaagatcaaccaggcggagggggtcggg
cagcgggagcccgatctcggcttcgcgtgggcggtccaccggtgggcctccggcaagggc
ctggacgaggtgctgcgcgacgcggagatgccggccggcgacttcgtccgctggtgcaag
caggtcatcgacgtgctcggccaggtcgcggcggcggcgccccgggagaacagcacggtc
gcgaagaacgcccgcaaggcggtggacgcggtgctgcgcggagtggtggcgtacagctcg
gtggggtga
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