Streptomyces liangshanensis: HA039_28940
Help
Entry
HA039_28940 CDS
T07519
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
slia
Streptomyces liangshanensis
Brite
KEGG Orthology (KO) [BR:
slia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slia03021
]
HA039_28940
Transcription machinery [BR:
slia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HA039_28940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
KORA
DUF7343
NirdL-like_HTH
MarR_2
HTH_23
HTH_37
HTH_3
GerE
Motif
Other DBs
NCBI-ProteinID:
QIQ07221
UniProt:
A0A6G9HAI9
LinkDB
All DBs
Position
6665112..6665969
Genome browser
AA seq
285 aa
AA seq
DB search
MSATSVRHAARQDAATTEHALPYLERPADVAPKDAREISKLFFARLSELEEGTRDHQYAR
NTLIELNLSLVRYAAGRFRNRADQMEDIVQVGTIGLIKAIDRFELTREVEFATFAVPYIV
GEIKRFFRDTSWAVHVPRRLQELRIDLARATDDLSQRLDRAPTTAELAEHLGLDEDEVIE
GVVAGNGYTAGSIDLPSDDSSEASAPLSDRLGAPDAGLETAENVQALKPLLKELDDRERQ
ILRMRFGDEMTQAEIGAELGVTQMHVSRLLSRITGRLRDGLLAVE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgacgagcgtccgccacgcggcgcggcaggatgccgcgaccacggagcacgcc
cttccgtacctggaacgcccggcggacgtggcacccaaggacgcgcgggagatctcgaag
ctcttcttcgcccggctctccgagctggaggagggcacgcgcgaccaccagtacgcgcgc
aacacgctcatcgagctgaacctgtcgctggtgcggtacgcggcgggccggttccgtaac
cgcgcggaccagatggaggacatcgtccaggtcggcaccatcggcctgatcaaggcgatc
gaccggttcgaactcacccgcgaggtggagttcgcgaccttcgccgtcccgtacatcgtc
ggcgagatcaagcggttcttccgggacaccagttgggcggtgcacgtcccgcgccggctc
caggagctgcgcatcgacctcgcccgggcgaccgacgacctgtcccagcggctggaccgc
gcgcccacgacggccgagctggccgagcacctcgggctggacgaggacgaggtcatagag
ggcgtcgtggccggcaacggctacacggccgggtcgatcgacctcccgtccgacgactcc
tcggaggcctccgccccgctctccgaccgcctcggcgcccccgacgcgggcctggagacg
gcggagaacgtccaggcgctcaagccgctcctcaaggaactggacgaccgcgagcgccag
atcctgcggatgcgcttcggcgacgagatgacgcaggcggagatcggcgccgaactgggc
gtcacccagatgcacgtgtcccgcctgctgtcccgcatcaccggccgcctgcgggacggc
ctgctcgcggtcgagtag
DBGET
integrated database retrieval system
