Streptomyces liangshanensis: HA039_32190
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Entry
HA039_32190 CDS
T07519
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
slia
Streptomyces liangshanensis
Brite
KEGG Orthology (KO) [BR:
slia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slia03021
]
HA039_32190
Transcription machinery [BR:
slia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HA039_32190
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR_2
HTH_Crp_2
HTH_37
HTH_23
PF0610-like_N
HTH_3
Sigma70_ECF
HTH_24
GerE
Topo-V_HhH_2_2nd
HTH_31
DUF7343
MarR
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QIQ07287
UniProt:
A0A6G9HB67
LinkDB
All DBs
Position
complement(7404195..7405079)
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AA seq
294 aa
AA seq
DB search
MPHPSTTPPRSRTAISDDDARTGGLPRIEDAEKITPRDARDLSRLFFDRLGVLEEGTPAY
QYARNTLIEMNLSLVKFAARRFRNRADQMEDIVQVGTIGLIKAIDRFELSREVEFTTFAV
PYIVGEIKRFFRDTSWAVHVPRRLQELRVELARAKDHLAVVLDRDPTVRELATHLELTED
EVIEGLVAANGYHSDSLDLPADPGTSSRGGTRTTSLADFVGTCDPAMELVEDFHSLAPLL
ATLGDRERLILELRFGQELTQAEIGERLGISQMHVSRLLSRTLTRLRAGLLVED
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgccccatccgtccacgacgccgccgcggagccggacagcgatatcggacgacgacgcc
cggaccggcgggctgccccggatcgaggacgcggagaagatcacgccgagggacgccagg
gacctgtcgaggctgttcttcgaccggttgggcgtgctggaggagggcaccccggcgtac
cagtacgcccggaacacgctcatcgagatgaacctgtccctggtcaagttcgcggcgcgg
cgcttccgtaaccgcgccgatcagatggaggacatcgtccaggtggggacgatcgggctg
atcaaggcgatcgaccggttcgaactgtcccgcgaggtcgagttcaccaccttcgccgtc
ccgtacatcgtgggcgagatcaagcggttcttccgtgacaccagctgggccgtgcacgtg
ccccggcgtctccaggagctgcgggtcgaactggcgcgcgccaaggaccacttggcggtc
gtcctggaccgcgaccccaccgtgcgcgaactcgccacgcacctggagctgaccgaggac
gaggtcatcgagggcctcgtcgccgcgaacggctaccacagcgactcgctcgacctgccc
gccgaccccggtaccagctcccggggcggcacgcggaccacctccctcgccgacttcgtg
ggcacctgcgaccccgccatggaactggtcgaggacttccacagcctcgccccgctcctg
gccaccctcggcgaccgcgaacgcctcatcctggaactgcgcttcggccaggaactgacc
caggccgagatcggcgaacgcctgggcatctcccagatgcacgtctcccgcctcctctcg
cgcaccctgacccgcctccgcgccggactccttgtcgaggactga
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