Sphingomonas lindongxini: SH584_05935
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Entry
SH584_05935 CDS
T11838
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
Organism
slid Sphingomonas lindongxini
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Paralog
GFIT
Motif
Pfam:
DEAD_assoc
WHD_Lhr
DEAD
Helicase_C
ResIII
Cas3-like_C_2
TRH
Motif
Other DBs
NCBI-ProteinID:
WRP27066
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Position
1167615..1170023
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AA seq
802 aa
AA seq
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MTDLPDVIAGWFDKRGWAPRRHQLAMLDVARKGDHALLVAATGAGKTLAGFLPTLVDLIE
RPTEGLHTLYVSPLKALAVDVQRNLLGPIAEMDLPIRVETRSGDTPSDRKARQRVKPPQI
LLTTPESLSLLLSYPDSEAMFAGLHTVVVDEIHAFAKEKRGDLLSLALSRLQAIRPEVRR
VGLSATIADPDAYRAWLAPDGDIDTVAMVQGDPGAEPDLTILIPDGRVPWSGHSGRYAAK
QVMELIEQHKTTLVFCNTRSLAELIFQELWTANDAQLPIGIHHGSLSLEARRKVEAAMSD
GRLRALVATASLDLGIDWGDVDLVVQMGAPKGSSRLLQRIGRANHRLDEPSRGMVVPGNR
FEYLEARAALDAVDAKELDPEIFRPGTLDVLAQHILSVACAAPFEEAALLAEVRTAAPYS
GLTDETWRQVLEYIATGGYALRAYDKFKRLVEDRPGHWRVTRPAVIAQHRLNAGVIVDNP
MMDVRFKNGRMLGRVEEGFASTLTIGDHIFFAGLSLEVVGMKDSDILVRASTKQARLVTY
GGQRMSMSTHLADRVRGYLADDRDWHRFPDDVREWLEVQKRRSILPQPDQLLVETFPHEG
RHFMCAYSFEGWNAHQSLGMLVTKRMESAGLKPLGFVANDYAIACYGLEPVTDPRPLFSP
DILEQEFVEWIEQSHLLKRAFREVAVIGGLVERQHPGKRKTGKQVSFSTDLIYDVLRKYE
PGHLLLKAAWEDARARMTELGRLARLVDRAAETMVHVQAERVTPLAVPLMVVIGRESVPA
GTAEDQLLIEAEALAAEAMRLD
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
ctgaccgaccttcccgatgtcattgccggctggttcgataagcgcggctgggcgccgcgc
cggcaccagttggcgatgctcgacgtcgcgcggaagggcgaccacgcgctgctcgtcgcc
gccaccggggcgggcaagacgctggcagggttcctgccgactctggttgacctgatcgag
cgaccgaccgaaggcctgcacacgctttacgtgtcgccgctcaaggcgctcgcggtcgac
gtgcagcgcaacctgctcggcccgatcgccgagatggacctgccgatccgggtcgaaacg
cgtagcggcgacacgccgtcggatcgcaaggcgcgtcagcgggtgaagcccccgcagatc
ctgctgaccacgccagaatcactgtcgctgctgctgagctatcctgacagcgaggcgatg
ttcgcgggcctccacaccgtcgtcgtcgatgaaatccacgccttcgccaaggagaagcgc
ggcgacctgttgtcgctcgcgctgtcgcggctgcaagcgatccgacccgaagtgcgccgc
gtcggcctgagcgcgaccatcgccgatcccgacgcctatcgcgcgtggcttgcgcccgac
ggcgacatcgacaccgtcgcgatggtccagggcgatcccggcgccgagcccgacctcacc
atcctgatccccgacggccgcgtgccatggtcgggccattcgggccgttatgcggcgaag
caggtcatggagctgatcgaacagcacaagacgacgctcgtcttctgcaacacgcgcagc
ctcgcggagctgatcttccaggaattgtggaccgccaacgacgcgcaactcccgatcggc
atccaccacggcagcctaagcctcgaggccaggcgcaaggtcgaggcggcgatgagcgac
ggccgcctgcgcgcgctcgtcgccacggccagcctcgatctcggcatcgactggggcgac
gtcgacctcgtcgtgcagatgggcgcgccgaagggaagctcgcgcctgctccagcgcatc
ggccgtgccaaccaccggctcgacgagccgtcgcgcggaatggtcgtgcccgggaaccgc
ttcgaatatctggaggcacgggcggcgctcgacgcggtcgacgcaaaggagctcgacccc
gagatcttccgcccgggcacgctcgacgtgcttgcccagcatatcctctcggtcgcgtgc
gcggcaccgttcgaggaggccgcgctgcttgccgaggtgcgcaccgccgcgccctactcg
gggctgaccgacgagacgtggcgccaggtgctcgaatatatcgcgaccggcggctacgcg
ctgcgcgcctacgacaaattcaaacggctggtcgaagacaggcccggccactggcgcgtc
acccggcccgcggtgatcgcacagcatcgcctcaatgccggggtgatcgtcgacaatccg
atgatggacgtccgattcaagaacgggcggatgctcggccgtgtcgaggaaggctttgcc
tcgacgctgacgatcggcgaccacatcttcttcgcgggcctcagccttgaggtcgtcggc
atgaaggacagcgacattctcgtccgcgcctcgaccaagcaggcgcgactggtcacctac
ggcgggcagcgcatgtcgatgtcgactcacctcgccgaccgggtccgcggctacttggcc
gacgaccgcgactggcaccgcttccccgacgacgtgcgcgaatggctggaagtgcagaag
cgccgctcgatcctgccgcagcccgaccagctgttggtcgagacctttccgcacgaaggt
cgccacttcatgtgcgcctacagtttcgaagggtggaacgcgcaccagtcgctcggcatg
ctcgtcaccaagcggatggagagcgcgggcctcaagccgctcggcttcgtcgccaacgac
tatgccatcgcctgctacgggctggagccggtcaccgacccgcgtcctctcttttcgccc
gacatcctcgaacaggaattcgtcgagtggatcgaacaatcgcacctgctgaagcgcgcc
tttcgcgaggtcgcggtgatcggcggactggtcgagcgccagcatccgggcaagcgcaaa
accggcaagcaggtcagcttttcgaccgacctcatctacgacgtgcttcgcaagtacgaa
ccgggccacctgctgctgaaggcggcgtgggaggatgcgcgggcgcggatgaccgagctt
ggccggctcgcccggctggtcgatcgggccgccgagacgatggtccatgtccaggccgag
cgcgtcaccccgctcgcggtgccgctgatggtcgtgatcgggcgcgagtcggtaccggcg
gggactgcagaggaccagttgctgatcgaggccgaggcactcgccgccgaggcgatgcgg
ctcgactga
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