Sphingomonas lindongxini: SH584_06705
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Entry
SH584_06705 CDS
T11838
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
slid Sphingomonas lindongxini
Pathway
slid03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SH584_06705 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slid03021
]
SH584_06705 (rpoZ)
03400 DNA repair and recombination proteins [BR:
slid03400
]
SH584_06705 (rpoZ)
Enzymes [BR:
slid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SH584_06705 (rpoZ)
Transcription machinery [BR:
slid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SH584_06705 (rpoZ)
DNA repair and recombination proteins [BR:
slid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SH584_06705 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
WRP24760
LinkDB
All DBs
Position
1327316..1327657
Genome browser
AA seq
113 aa
AA seq
DB search
MARVTVEDCVDKIPNRFDLVLMAAQRARQISGGADLTIDRDRDKNPVVALREIAETTVRP
KHLEEAIVSNLQKVRIDEDDETDELASLSESAEALRLTAAAPPRPSPSGGDYE
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgtcacagtcgaagattgcgtcgacaagattcccaaccggttcgacctcgtc
ctgatggccgcgcagcgtgcgcgccagatttcgggcggtgccgacctgaccatcgatcgc
gatcgcgacaagaatccggtcgtcgcgcttcgtgagatcgccgagacgacggttcgtccc
aagcatcttgaggaagcgatcgtttcgaacctgcagaaggtccgcatcgacgaggacgac
gagaccgacgaactggcatcgctgagcgaatcggccgaggcgcttcgtctcaccgccgcc
gctccgccgcgtccgagcccgtcgggcggtgattacgagtga
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