Sodalis ligni: GTU79_00485
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Entry
GTU79_00485 CDS
T08321
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
slig
Sodalis ligni
Pathway
slig02010
ABC transporters
slig02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTU79_00485
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GTU79_00485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_00485
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
GTU79_00485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QWA13758
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All DBs
Position
108014..109621
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AA seq
535 aa
AA seq
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MTISLTKSGILKVGISLAALAVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTFDASSVPI
YNRLVDFKLGTTEVIPSLAEKWDISADGKTYTFHLRHGVKWQESKDFKPTRELNADDVVF
SFTRMKDANAPYHKVSGGSYEYFDGMGMGDLISSVEKVDDYTVRFNLTRAEAPFLADLGM
DFASIMSAEYGDVMMKAGTPEKIDLNPIGTGPFQLLQYQKDSRILYKAFENYWGTKPKID
RLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKDITMLSQPGLNVGYLSFNVQ
KKPLDNLKVRQALTMAVNKSAIIDAVYQGAGQAAKNLIPPTMWSYNDAVQDYPYDPVKAK
ALLKDAGFPDGFSIDLWAMPVQRPYNPNARRMAELIQSDWAKIGVKAKIVSYEWGEYLKR
AKAGEHQTVMMGWTGDNGDPDNFFATLFSCDAAKDGSNYSRWCYKPFEDVIQPARSTSDQ
AKRIELYKQAQVVMHDQAPALIIAHSTVYEPVRKEVKGYVVDPLGKHHFENVSLE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgacaatttccttgaccaaatcagggatactgaaggtcggcattagcctggctgcttta
gctgtggctgccagcgttcaggccaaaaccctggtgtattgctcagagggttcgcctgaa
gggttcaatccgcagctgttcacctccggcaccacctttgacgccagttccgttcctatc
tataaccgcctggtggattttaaactcggcactacggaagtgattccgagtctggcggaa
aaatgggacatcagcgccgacggtaaaacctataccttccatttgcgtcacggcgtcaag
tggcaggaaagcaaggatttcaaaccgacgcgcgaacttaacgccgacgacgtcgtcttc
tcctttacgcgcatgaaagatgccaatgccccctaccataaagtttccggcggcagctat
gaatactttgacggcatgggcatgggcgatttgataagcagcgtggaaaaggtcgacgat
tataccgtccgctttaacctgacccgtgcagaggcgcctttcctggccgatttaggcatg
gacttcgcttccattatgtccgccgaatatggggatgtgatgatgaaagccggcacgccg
gaaaaaatcgacctgaacccaatcggcaccggtccgttccaactgctgcagtaccagaag
gattcacgcattctgtataaagcgtttgaaaactactggggcaccaaaccgaaaatcgat
cgcctggtattctccattacccccgacgcgtcggtacgttacgccaaactgcagaaaaac
gaatgccaggttatgccgtacccgaatccggccgatatcgcccgcatgaagcaggacaaa
gatatcaccatgctgtcccagccgggtctgaacgtcggttatctgtcgttcaacgtacaa
aagaaaccgttggacaacctgaaggtccgccaggcgctgaccatggcggtgaataaatcc
gccatcatcgacgccgtttaccagggcgccggccaagcggccaagaacctgatcccgccg
accatgtggagctataacgacgcggtgcaggattatccttacgatccggtcaaggctaaa
gcgctgctgaaagatgccggtttccccgatggcttctccatcgatttatgggcgatgccg
gtacagcgtccctacaacccgaatgcccgtcgcatggcggagctgattcagtccgactgg
gcgaaaatcggcgtgaaagccaagattgtcagctatgaatggggcgagtatcttaaacgc
gccaaagccggcgagcatcagaccgttatgatgggctggaccggcgacaatggggatccg
gacaacttcttcgccaccctgttcagctgcgatgcggctaaagacggctccaactattca
agatggtgctacaaaccgtttgaggacgtgatccagccggcccgcagcacttccgatcag
gcaaaacgtatcgagctgtacaagcaggctcaggtggtgatgcacgatcaggcccctgcg
ttaatcattgcccattcaacggtgtacgaaccggtgcgtaaagaagtcaaagggtacgtg
gttgatccgttaggtaaacatcatttcgagaacgtatctttagagtaa
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