Sodalis ligni: GTU79_01885
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Entry
GTU79_01885 CDS
T08321
Name
(GenBank) hemagglutinin repeat-containing protein
KO
K15125
filamentous hemagglutinin
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
slig00536
]
GTU79_01885
Glycosaminoglycan binding proteins [BR:
slig00536
]
Heparan sulfate / Heparin
Microbial pathogens
GTU79_01885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
PT-VENN
ESPR
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
QWA11596
LinkDB
All DBs
Position
423844..432702
Genome browser
AA seq
2952 aa
AA seq
DB search
MNKNLYRIIFNQARGMLMVVADIACAGHVCSGRGQPGRILPKAGRPCRLATLNFCLLMAF
GGISFSARAGFAVDPHAPGDQQPNITQTANGIPQIDIQTPNEHGLSHNSFSQFDVDPSGV
ILNNSREHTQTQLGALVDGNSSLARGEASVILNEVNSPHGSHLNGAIEVAGRRADVIIAN
PSGITCDGCGFINAHNATLAAAQALVQDGRLKGFDVERGEIVFEGRNVNLNTNHALLIAR
AVRVNVEVQAGELTLTTGRNVTDSRGNVTHKKADNESPSRYALDVAALGGMYARKIQLVG
NEHGLGVRNAGHIGAGVGEITLTIAGRLENSGSISSASDLHITVVDDVHNPGRMSSQGDV
VLQVAGELNSSGTIAARGAISANSASLRSGKGSVWEAGRDEQGNATPAGHLLLTASGAIT
LGGDNRTSGTLTAAGSTLDLSGSQTTAPRINLSASQGETRLTGAVVHAPGGSLTINSPQG
INSENGNLVAQEITLTTATLSNKKGVIHQTGSQDLILAIQSPSDSSAPQPSGSGVRNGGI
QNNQVIDGDSPQDVVSPDIAVTLNNAGGMIQTAGNVTVVTGRLANTDGMIQAAGNASVMA
KTIDNQKGKLLSEGNASVAVSTLANQGGVIQAPDRVKINAGTLDNSAEGRIVTKGDGEIK
ARSLDNTQGLIDVSGNLKIHAGTLDNHAGKIHTLGAAVVDATERLDNTHGELHAAGVTLG
IGTLYNYAGEIHSSGFAVINSAIELDNSKGEIRADGDLTLKTNALDNSGGKLFSLGDTHL
INANPTLVGAFINAGGSIQGNRHLDIDTGAMGFDNRQGTLTSLNTLQVKASALDNRNGRI
YVVDKATLLIGERLDNDAGTIQGGNQLAIRADEVINTNTRRDQLGIQAPRMHINARRLDN
AKGSLKGGEQLEVTLTETLDNRQGQLSAKKIKLGDDVLGHRLEADNDGGEMIAEEQGFYL
LRRLTGGGRISSIGDLVIGLQNDFHLTGEINAGGNLTLNTAGSIRNDHLLTAGGISFLDA
ATLMNNTSAHLKAGDLQLTLPGTLSNHGQIEIGTGELSAQSLNNAAGATLKADELRLTLQ
SGLDNGGVINAGTTRLNAAFLNNATAAQIHAKALLLTLRDGLENSGLINTAKGQLNAQSL
VNASAAEITAADLHLTLRDGLDNVGLIDADTLRLEAKALSNVGSGRIFGDHVALRTDRLE
NHAQEGQAGVIAARERLDIGAGHIDNRDKALILSNGNMSIGGGLDADGKATGRAGSLVNH
DAEINADGDMTIAAREITNSNGGMVLTRVSSKENRHEAVLKGKTTRYDWNNVRRKKEAYG
VHEAYMPDGSHNNNFYEYRYTRHITEDAVQESNPAKILAGGLLTVDAESFINRDSQVSAG
GVIDAKIGDLRNESAQGERITQDLGRQTRWYAKKHKKKMGGTKTSQGRDGSRYRPIPIRE
TIDLKTAAWKENTRSDSGSPETRPALSGLFGRIRHNDEESFTEHWNHSPFKAPIPPEGPE
QLFFRPLDLAVGEFYENPLPPVLTAGNTWTPAVRVMVPEVRLPASSLFSQHPGPANPYLV
ETNPRYTQYKQWIGLDYMQQKMKFDHNYTHKRLGDGFYEQRLVRDQVLNLTGQRYLDGHT
NDNEQFKALMNAGVQYGKAFNLTPGVMLSPSQMALLTTDMVWLINQDVTLKDGSTQRVLV
PQVYARVGKGDLSGDGALFSGQDIKLEVAGNLDNSGGITARETLKVSAENVSLSGQMAAK
DIDVQARKDINQTGGRLFGGDRLSLLAGQDIRIQSTARGEQDNRWLDRTAGIYVQNPGGA
LELKALNNITLTAADIANQGESGRTEITAGNDLKLYTLRTANTDKAYWDQDNYRLESQRT
DAGTRITSGGGLALSAGRDVSASAANIDAAQRLDLDAGRDITLSAGRAATSVVEHMKQSS
SGMLSSMSLETHDEVHSRQALGTLLSGDEISLNAGRDLTVTGGGIAGTQDIALTAGNNLT
LTTALETHHENHFRQEQSSGLMGSGGIGFTVGSESLTLTDDTLLHQQKGTLAGSAEGSAT
LSAGGRLTVHGSELIAGNGMALSGADVDLTAAENSIIQHQTMEQKKSGFTLALSGTVGSA
INSAVESAQQAEKTDNSRLAALQRAKAALSGAQAVQAGRIAAAQGDSPENNNTIGVSLSY
GSQSARSEQRHEQRMAQGSSLSAGGAMTVTATGRGGGGDIILQGGQLKAGSDISFKAKQD
IHLLSALSREKTEGSNSSQGGSVGVGIGVGQGGFGISVFAGINKGKGSEKGNGTFHTNAL
LDAGRQVRLESGRDAILSGAQVKGETVKADIGRHLLLQSRQDSNDYDAKQQNVSAGGSFT
FGSMTGSASVNVSRDKLRSNYSAVQEQTGLFAGQGGADIRVGEHTQLDGAVIASAADASK
NRLDTGTLGFSDIHNEAEFSAEHQSIGLSSGGPIGGQFTGNLANGLLSGVNRSGHSSNTT
RAAFSPGSLLIRNQAEQRQDIAALSRDAEHAHETLSPIFDKTKEQERLQQAALLGDIGNQ
LIDIVRSEAAIGALNVANKRAENISEADRQDARDALAKGKNPNETPTDKQIKDYIRGNAY
NQALSESGFGTGGGNLKALTAVVAAAQGLAGGNPGQALAGLAAPYVATEIKERFDTDTAR
ITAHAVAGAMLSHLQGHSALAGGAGALSAEVAAKGITHYLYPGIEPGQLTEKQKETVSAW
SSMVGGLAGGLTGKGGGDVVAGAQAGKNAVENNSLGGAAAGSGLGLWLGEIPDCDTECKA
QLAGDIAQGNAKVSAHLAGTIGLAMLPGGAQVAAGIGSGANAAIQYAVDGEVSYTDALIA
GWVGGLTATSGFGVTVGVNAVGGAASNAIKGDDPLTGAITSGLGAVGGYGIGKGAILGSN
AIGKYATKGWNPKFDPNHLKYREVKGLMGISKEMSPSKIPGVAGNVGSSAATEIGTKILE
KRVEKLKTQNDE
NT seq
8859 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaatctgtatcgaatcatttttaaccaggcgcgcggcatgctgatggtggtg
gcggatatcgcttgcgccggtcatgtatgctcagggcggggccaacctgggcggatacta
ccgaaggcgggtcgcccctgccggctggcgacgctgaacttttgtttgctgatggctttc
gggggcatttcattttccgcccgggccggcttcgccgtcgacccccatgctcccggagat
caacagcccaatatcacccaaaccgccaacggcattccgcaaatcgatatccaaacgccc
aacgaacacggactttcccataattctttcagccaatttgatgtggatccgtccggtgtg
atccttaataacagccgggaacatacgcaaacgcagctcggcgctctagtggacggcaat
tcatccctggcccgtggcgaggccagcgtgatactcaatgaggtgaattccccccacgga
agccacctaaacggtgctatcgaagtggccggccgccgcgcggacgtcattattgccaat
ccctcaggcatcacctgcgacggctgtgggtttatcaacgcccataacgccaccctggcc
gccgcccaggcgctggtgcaggacggccggctaaaaggctttgatgttgaacgcggcgag
atcgtgtttgaaggccgcaacgtcaacctcaacaccaatcacgctttgctcatagcccgt
gccgtgcgggtcaacgtcgaggttcaggccggcgagctgaccctcaccaccggacgcaat
gtaacggacagccggggcaacgtcacccacaagaaagcggataacgagtccccttcccgc
tatgccctggatgtggcggcgctggggggcatgtacgcccgtaaaatacagttggtgggc
aatgaacacggtctgggggtgcgcaatgccggccatatcggcgccggcgtcggtgaaatt
accctcacgatagcaggccggctggaaaacagcggctcgatctccagcgcgtccgatctg
catatcaccgtggtggacgacgtgcataatccggggcgcatgtcatcccaaggcgatgtc
gttctgcaggtggccggtgagttaaacagcagcggcaccatagcggcccgcggcgctatt
tccgccaactcggccagcctgcgcagcgggaaaggaagtgtctgggaagccggccgggat
gagcagggcaatgcaacaccggcaggtcatctgctgctgaccgcttccggcgccatcacc
ctcggcggcgacaatcggactagcgggacactgacggcggcgggttcgaccctcgacttg
tcaggcagccaaacaacggcgccgcggataaatctcagcgcatcccagggcgagacccgt
ctgaccggcgccgtcgtccatgccccgggtggctcgctcacgattaactctcctcaggga
atcaatagtgagaacggcaacctggtcgcccaagagataaccctcaccaccgccaccctg
agcaataaaaagggcgtcattcaccaaaccggatcccaggatttgatcttggcgattcaa
tccccgtccgatagctcagcccctcagccttcgggttccggggtgcgcaatggcggtatt
cagaataaccaggtaattgatggcgatagcccacaggacgtcgtatctcccgatattgcc
gtcacgctgaataatgccggcggcatgatacagaccgcaggcaatgtcacggtggtcacc
ggacgcctggccaatacggacggcatgatacaagcggcgggaaacgcgtcggtgatggcg
aagactattgacaaccaaaaaggcaagctgctttctgaagggaatgcctcggtggccgtt
tcaacgcttgccaaccagggtggcgtcattcaggcaccggatcgcgtcaagatcaatgcc
gggacgctggataatagcgccgaaggccggatagttacgaaaggcgatggcgagataaaa
gcccgatccctggataacactcagggcttgatagacgtcagcggcaacctgaagatacat
gccggaacgctggacaaccatgccggtaaaattcataccttgggcgccgcggtagtggat
gccacggagcggctggacaacacccatggcgagttacatgccgccggcgtcacgctgggt
atcggcacactgtacaactatgccggtgagatacactcctccggctttgcggtcataaac
agcgccatagagctggacaatagcaagggcgagatccgtgctgacggcgacctcaccttg
aaaaccaatgcactggacaacagcggcggaaagcttttttccctgggagacacccatctt
atcaacgccaatccgaccctggttggcgcttttatcaatgccggcggcagtatccagggc
aatcggcatctggatatcgacaccggcgcaatgggctttgacaaccggcaaggtacgcta
acgtctttaaataccctgcaggtgaaagcctccgcccttgataaccggaacggccggatt
tacgtggtggacaaggcaaccctgctgattggcgaacggctggacaacgacgcgggaacg
attcagggcggcaaccagctagccatccgtgccgacgaggtgattaatacgaatacccgc
cgggaccaactgggcattcaggccccacgaatgcacatcaacgcccggcggctggataat
gcaaaaggctcgctcaaaggcggggaacagcttgaggtcaccctcaccgagacgctggac
aaccgtcagggacagctgtccgccaaaaaaatcaagcttggggatgatgttttgggacat
cggctggaagcggacaatgacggcggagaaatgattgccgaggaacagggtttctacctc
ctgcgccgcctgacgggtggcggtcgaatcagctcgataggggatttggttatcgggctg
caaaacgatttccaccttaccggcgagataaatgccggcggcaatttgacgctgaataca
gcgggcagtatccgcaatgatcatctcttaaccgccggcgggatatcattcctcgacgcc
gccacattgatgaataacacatcggcgcacctcaaggccggtgatttgcagctcaccctg
cccggtacgctgagcaaccatggtcaaatcgagatcggtacaggggagcttagcgcccaa
tccttaaacaatgcggcaggggcgacccttaaagccgatgagctgcggctcactttacaa
agcggcctggataacggcggcgtgatcaacgccggcaccactcggctcaatgcagcattc
ctgaacaacgccacggcggcgcaaatccacgccaaagctttgttactcacgctgcgggac
ggactggaaaacagcgggctgattaacaccgctaaaggccagctcaacgcgcaatccctg
gtcaatgcatcggcggcagaaatcaccgccgccgacctgcaccttacgctgcgcgacgga
cttgataatgttggcctgattgacgccgatacattgcgtcttgaagctaaagcgctttcc
aacgtcggtagcgggcgcattttcggcgatcatgtcgccctgcgaaccgatcgtctggaa
aatcacgcccaggaaggccaggcaggcgttatcgccgcccgtgaacgcctggatatcggc
gccggccatatcgacaatcgcgataaggcactgattctcagcaacggcaatatgtccatc
ggcggcggactggatgccgatggaaaagcaacgggccgggccggcagcctggttaatcat
gacgccgagataaacgctgacggcgatatgaccatagccgcccgtgaaatcaccaacagc
aacggcggtatggtcctgaccagggtttccagcaaagaaaaccgccatgaagcggtatta
aagggcaagactacccgctacgactggaacaacgtcaggcggaaaaaagaagcctacggg
gttcacgaagcctatatgcctgatggcagccacaacaataacttttatgaataccgctat
acccgccatattaccgaagatgccgtacaggaaagcaatccggcgaaaatcctggccggc
ggcctgcttaccgtagatgccgaatcctttatcaatcgcgacagccaggtgagcgccggt
ggtgtcatagacgccaaaatcggcgatctgcgcaatgaatcggctcaaggcgaacggatc
actcaggatcttggcaggcaaacgcgctggtatgcaaaaaaacataagaaaaagatgggt
ggcaccaaaacgtcccaaggtagggacggcagcagatatcgtcccatccccatcagggaa
accatcgacttaaaaaccgctgcctggaaggagaacacccgtagcgattccggctcacct
gagacccgcccagcgcttagcggcctgttcgggcgcattcgccataacgacgaagagtca
tttaccgagcattggaatcactcgccctttaaggcgccaatcccgccggagggtccggag
cagctgtttttccgcccgctggatttggcagtcggcgagttttatgagaatcccttgcca
ccggtgttaactgccggcaatacctggacgccggcggtgcgcgttatggtgccggaggtc
cgtctgcctgccagcagcctgtttagccagcaccccggtccggccaacccttatctggtt
gaaaccaatcctcgatacacccagtacaagcagtggatcggcctggattatatgcagcaa
aaaatgaaatttgatcataactatacccataaacgcctcggcgacggcttttacgagcaa
cgcctggtgcgggatcaggtgcttaacctcaccggccagcggtatctcgacggtcacacc
aacgataacgaacagtttaaagcactgatgaacgccggtgtgcaatatggcaaggctttt
aatctgacgccgggggtcatgctcagtcccagccagatggcgttgctcaccactgatatg
gtgtggctgataaatcaggatgttaccttgaaggacggcagcacacagcgggtgctggtg
ccccaggtctacgccagagtgggcaaaggcgatctgtccggcgacggcgcactgttctcc
ggccaggacatcaagctggaggtggccggcaacctggacaacagcggcggcatcaccgct
cgtgaaaccctgaaagtgtccgcggaaaacgtttccctcagcggacagatggcggccaaa
gacattgacgtacaggctaggaaggatatcaatcagaccggcggacgcctgttcggcggc
gacaggctctcgctgctggccggacaggatatccgcatccagtccacggcgcgcggcgag
caggacaatcgctggctggatcgaacagcgggcatctacgtacaaaatccgggcggcgcg
cttgaactcaaagccttgaacaatatcaccctcaccgccgccgatatcgccaaccagggc
gaaagcgggcgcactgagatcacggcgggcaatgatctcaaactgtatacgctgcgcacc
gccaataccgacaaggcgtattgggaccaggacaattatcggctggaaagccagcggaca
gacgcgggtacccgtatcaccagcggcggtggccttgccctgtcggcgggacgggatgtc
agcgccagcgcggccaatatcgacgccgcgcagcggctggatctggatgcggggcgggat
atcaccctgtcggcgggccgggcggctacctcggttgtcgaacatatgaaacaaagcagc
agcggcatgctgtcgtccatgtccctggaaacccatgacgaagtccatagccgacaggcc
cttggcaccttgcttagcggagatgagatcagccttaatgccggccgcgacctgacggtt
accggcggcggcatcgccggcacccaagatatcgctttaacggccggcaacaacctgacc
ctgaccacagccctggaaactcatcatgaaaatcacttcaggcaggagcagagctcaggc
ctgatgggcagcggcggcatcggtttcaccgtgggttctgaaagcctgacactcaccgat
gataccctcctccaccagcaaaaaggcaccctggcgggcagcgccgaaggaagcgccacg
ctgagcgcgggcgggcggctaaccgtccacggcagtgaactgatcgccggtaacggcatg
gctctcagcggtgctgacgtcgatcttaccgccgctgaaaacagcattatccagcatcaa
accatggaacagaaaaaaagcggcttcaccctggcgctctccggcacggtgggcagcgcc
atcaacagcgcagtggaaagcgcacagcaggcggaaaaaaccgataactcccgcctggcg
gccctgcagcgcgccaaggcggcgctgagcggcgcacaggcggtacaggccggacgcata
gcggcggcccagggcgattcaccggaaaacaacaacaccatcggcgtcagcctctcttac
ggcagccagagcgccagatccgaacaacgccatgaacagcgcatggcccagggcagcagt
cttagcgccggcggcgcaatgaccgtcaccgccaccggccggggcggcgggggcgatatc
attttacagggcggtcagcttaaggcgggcagcgatatcagcttcaaggccaagcaggat
atccatctgctttccgccctgagccgggaaaaaaccgagggcagcaacagcagccagggc
ggctcggtgggggtgggcatcggcgtcggccagggcggcttcggcatcagcgtgtttgcc
ggtatcaacaaaggcaaaggcagcgagaaaggcaacggcaccttccataccaacgccctg
ctggatgcgggacggcaggtccgccttgaaagcggacgcgacgccatcctgtccggcgcg
caggtcaagggggaaacggtgaaagccgatatcggccgccatttgctgttgcaaagccgg
caggacagcaatgactacgatgctaaacagcagaacgtcagcgccggcggtagcttcacc
ttcggctccatgaccggctcggccagcgtcaacgtcagccgggacaagctacgcagcaac
tacagcgcggtgcaggaacagacgggtctttttgccggccaaggcggggcggatatccga
gtgggcgaacacacccaactggacggggcggttatcgccagcgccgccgacgcaagtaaa
aaccggctggacaccggcaccctgggcttcagcgatattcacaatgaggctgagttcagc
gccgaacaccaaagcatcggcttgagcagcggcggccccatcggcggccagttcaccggc
aacctggccaacggcctgctgtcgggggttaaccgctcgggccatagcagcaataccacc
agggcggcgttcagccccggcagcctgcttatccgcaatcaggcggagcaaagacaggat
atcgctgccctgagccgggatgcggagcacgcccacgagactttaagcccgatatttgat
aaaaccaaagagcaggagcggctgcaacaggccgcgctgctgggggatatcggcaatcag
ctgatagatatcgtgcgcagcgaggcggccatcggcgctctcaacgtcgccaacaaaagg
gcggaaaacatcagcgaggcggaccgtcaggatgcccgtgatgcgctggcaaagggtaaa
aaccccaacgaaaccccaacggataagcaaatcaaggactatatccgtggcaatgcctat
aatcaggcattgtcggaatcgggattcggcaccggcggcggcaacctcaaggcgctcacg
gcggtggttgcggcggcgcagggactggcgggcggtaatccgggccaggcgctcgccgga
ctggcggcgccgtatgtggccacggagataaaagagcgtttcgacaccgacacggcgcgt
atcaccgcccatgcggtggcgggcgccatgctgtcgcatctgcaaggccacagcgccctt
gcgggcggcgcgggggcgttaagcgccgaggtggcggccaagggaataacccactatctg
tatccgggcatcgaaccgggacagttgacggaaaagcaaaaggagacggtcagcgcctgg
agcagcatggtaggcggcttggccggcggattgacagggaaaggcgggggagatgtggtg
gccggagcgcaggcagggaagaatgcggtggagaataactcactgggcggggcggcagcg
ggttccgggcttggactgtggctgggtgagataccggactgcgatacggaatgtaaggcc
caactggccggggatatcgcgcaaggaaatgccaaggtgtcggctcatctggcggggaca
atcggtctggccatgttgcccggtggagcgcaggttgctgccggcatcggcagtggtgcg
aatgccgcaatacaatatgctgtggatggtgaagttagttacaccgatgcgctaattgca
ggttgggtcggtggtttaacggctacatctggttttggggtaacggtgggggtgaatgcg
gttggcggtgcggcgtcaaatgctattaaaggggatgacccgttaactggggctataact
agtgggttgggtgccgtaggaggatacggtatcggtaaaggcgcaatattgggatctaac
gctatcggtaaatatgcaaccaagggttggaacccgaaatttgatcctaaccatctcaag
tacagagaagttaagggattaatgggaatctctaaggagatgtccccgagcaaaattcct
ggagtagcaggcaacgttggatcatcagcagctacggaaattggtactaagatactagaa
aagcgcgttgagaagctgaagactcaaaacgatgaataa
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integrated database retrieval system
