Sodalis ligni: GTU79_02160
Help
Entry
GTU79_02160 CDS
T08321
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slig03000
]
GTU79_02160
Transcription factors [BR:
slig03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GTU79_02160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QWA11640
LinkDB
All DBs
Position
complement(490920..491894)
Genome browser
AA seq
324 aa
AA seq
DB search
MIDNDITFRKLEIFLAFMDKRNISRTADLLGLSTVSVHRALHTLEESVRCPLFIHQGRNL
SPIPAAETLAEYAREVVDLMKRGIEETRKSGGVGQGRLKLGTLYSLTLDTVPRLIMGLKL
RRPNLELELQMGSNQDLLLRLEDQQLDAILLSVSDTQIDPARFETLPLFNDDIFLAVPAS
AAHIVNGPADLRDFKDEKFVSLTEGFATYHGFQEAFHIAGFEPHIVTRVNDIFSMVNLVQ
AGVGCTLLPGRMKKIHDPAFRMLPLAAPYQMRQTIALVFARNREHDPDLLALLAEGRMYA
LGRRTSEAQAAPSLIAETSGRPGL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgattgataacgatatcacctttcggaagctggaaatcttcctggctttcatggacaag
cgcaatatcagccgtaccgccgacctgttggggttaagcacggtgagcgttcaccgcgcg
ttgcatacccttgaagagagcgtccgctgcccgctgtttatccaccaggggcgtaatctt
tcacccataccggcggccgaaaccctggcggaatatgcccgcgaggtggtggatctgatg
aaacggggcattgaggaaacccgcaaaagcggcggggtcgggcagggccggctaaaactc
ggcacgctctattctctcacccttgataccgtaccgcgattgatcatgggattaaaactg
cgccggccgaaccttgagctggaattacagatggggtcgaatcaggatctgctgctgcgt
cttgaggaccagcagttggatgccatcctgctgtcggtcagcgatacccaaatagacccg
gcgcgttttgaaaccctgccgttattcaatgacgatatttttttggccgtacccgcctcc
gccgcgcatatcgttaacggtccggcggatctgcgggatttcaaagacgaaaagttcgtc
tccctcaccgaaggattcgccacctatcacggcttccaggaagcctttcatatcgccggc
tttgaaccgcacatcgtcacccgcgttaacgacatcttctccatggtaaatctagtgcag
gccggcgtcggctgcactctgctgccggggcggatgaaaaaaatccacgatcccgccttt
cgcatgctgccgctggcggcgccataccaaatgcggcaaaccatcgccctggtctttgcc
cgcaaccgcgagcacgacccggatttactggccctgctggcggaaggcaggatgtatgcc
ctcggccgccggactagcgaagcacaggcggccccgtccctcatcgccgagacaagcggc
cggccagggctataa
DBGET
integrated database retrieval system
