Sodalis ligni: GTU79_03110 Help Entry GTU79_03110       CDS       T08321                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism slig  Sodalis ligni Pathway slig02020   Two-component system slig02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:slig00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     GTU79_03110 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     GTU79_03110 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:slig03021]     GTU79_03110 (rpoN) Transcription machinery [BR:slig03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      GTU79_03110 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  QWA11804 LinkDB All DBs Position complement(671283..672719) Genome browser AA seq 478 aa AA seqDB search MKQGLQLRFSQQLAMTPQLQQAIRLLQLSTLELQQEIQTALESNPLLEQSDVHEEIDTPH DAPDSESLDTREAMEQKDMPEELPLDATWDEMYSAGTPSGTGTDYRDEELPIYQGETIQT LQDYLMWQVELTPFSDTDIAIATSIVDAVDETGYLTVPLEDILESIGVESVTMDEVEAVL KRVQRFDPVGVAARDLRDCLLIQLSQLSKDFPYLAEARLIVTDYLDLLASHDFRTLLRST RLKEEVLKSAMALIQSLDPRPGQSINTTESQYVIPDVLVRKVHNRWTVELNTDSIPNLKI NQQYAALGNTTRNDADGQFIRSHLQEARWLIKSLESRNDTLLKVTRCIVEQQQAFFEQGE EFMRPMVLADIAQAVDMHESTISRVTTQKYLHSPRGIYELKYFFSSHVNTEGGGEASSTA IRALVKKLIAAENPAKPLSDSKLTTLLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV NT seq 1437 nt NT seq  +upstreamnt  +downstreamnt atgaagcaaggtttgcaactcaggtttagtcagcaactggccatgactccgcagttacag caggcgatacgtctgttgcaattgtccacgcttgaactccagcaggaaatacagactgcg ctggaaagcaatcctttactcgaacaatcggacgttcatgaagaaatagacacgccgcac gacgctcccgactccgaatccctcgatacccgcgaggcgatggagcaaaaggatatgccg gaagaactgccgctggacgctacctgggacgaaatgtattcagcgggcaccccgtccggc accggtacggattatcgcgacgaggagctgccgatttaccagggcgagaccattcagacg ctgcaggattatctgatgtggcaagtggagctgacgcctttttccgacaccgacatcgct atcgccacctccatcgtggatgcggtggatgagaccggttatctcaccgtgccgctggaa gatatcctggaaagcatcggcgtagagagcgtgaccatggatgaagtggaagcggtgctg aaacgagtccagcgattcgatccggtgggtgtggcggcgcgggatttacgtgattgcctg ctcattcagctctcgcagctgtcaaaggactttccgtatctggcggaagccaggcttatc gtcaccgattacctggatttgctggccagccacgatttccgtaccctgctgaggtcgacg cggctgaaagaagaggtgttgaaatcggcgatggcgctgattcaatccctggatccccgc ccgggccaatccatcaataccaccgaatcgcagtatgtgatacccgatgtcctggtgcgc aaagtgcataaccgctggacggtggaactcaataccgacagcattcccaaccttaaaatc aatcagcaatacgcggcgctgggcaacaccacccgaaacgatgcggacgggcagtttatc cgcagccacctgcaggaagcccgctggctgattaaaagtcttgaaagccgtaatgacacc ctgttgaaagtcacccgctgcatcgtagagcagcagcaggcatttttcgaacagggggaa gagtttatgcgtcccatggtgctggcggatatcgcccaggcggtggatatgcatgaatca accatatctcgcgttaccacgcaaaaatatctgcacagcccgcgcggtatctacgaactt aaatattttttctccagtcacgtcaataccgaagggggcggcgaagcttcctcaacggcc attcgcgcgctggtgaaaaaactgatcgccgcagaaaacccggcgaagccgctcagcgac agcaagctgactaccctgctttccgatcagggtattatggtagcacggcgtaccgtggca aaatatcgtgagtccttatccatcccgccgtcgaaccagcgaaaacaattggtttga

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