Sodalis ligni: GTU79_03505
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Entry
GTU79_03505 CDS
T08321
Name
(GenBank) ABC transporter permease subunit
KO
K10020
octopine/nopaline transport system permease protein
Organism
slig
Sodalis ligni
Pathway
slig02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTU79_03505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_03505
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Octopine/nopaline transporter
GTU79_03505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QWA11874
LinkDB
All DBs
Position
749444..750163
Genome browser
AA seq
239 aa
AA seq
DB search
MNNESFFTLVGFSANGWGAILLSGVAVTLAAAVSGLVLGLLIGVFGAWAKISGGKTLRFL
ADAYTTLLRGVPDLLVIYLFYFGSSSILTAIAGYFGSKGFFALPGFIAGTIAIAVIAGAL
STEVLRGAFQAVSKGELEAARAYGMGFFLRFRRIITPLTLRHALPGISNVWLGLLKESSL
LSVTGVAELMRQAQVASGSTRLPFNFFLAAAALYIILASFSGVLVHLSERHYSRGTRRT
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaataacgagagcttttttacgttggtgggatttagcgcgaacggctggggcgccatc
ctgctctccggcgtcgcggtcaccctggcggcggccgtcagcggtttggtgctcggcctg
ctcatcggcgtatttggcgcctgggctaaaatatccggcggcaaaaccctccgtttttta
gccgatgcctataccactctgctgcggggcgtgcccgatctgctggtcatttatttgttt
tatttcggcagcagctccatcctgaccgccatcgccggttacttcggcagcaagggcttt
ttcgccttgccgggtttcattgccggcaccatcgccatcgccgtcatcgccggcgccttg
agtaccgaagtgctgcgcggcgcattccaggcggtatcaaaaggcgaactggaggcggcc
cgggcgtacggcatgggttttttcctgcggtttcggcggattatcacgcccttgacgctt
cgtcacgccctgcccggtatcagcaatgtctggctggggctgcttaaggaatcctcgttg
ctgtcggttacgggcgtggcggagctgatgcggcaggcccaggtggcttccggatctacc
cgcctgccgttcaacttctttctggcggccgccgcgctgtatatcatcctggcgtccttc
tccggtgtgctggtccacctgtctgaacgccactattcacgcggcaccaggaggacatga
Sodalis ligni: GTU79_25900
Help
Entry
GTU79_25900 CDS
T08321
Name
(GenBank) ABC transporter permease subunit
KO
K10020
octopine/nopaline transport system permease protein
Organism
slig
Sodalis ligni
Pathway
slig02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTU79_25900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_25900
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Octopine/nopaline transporter
GTU79_25900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QWA10589
LinkDB
All DBs
Position
complement(5540144..5540860)
Genome browser
AA seq
238 aa
AA seq
DB search
MLEMLGFSSDGWSGMMLLAALTTLGLTFAALLVGSVFGAWVAGAKLSRRRLWRFFGDGYS
VIFRGIPELLIIYLFYFGGSGFLTVIGRFFGADGYIEVPAFLIGALAIGMISGAYQGEVY
RGAVMAVSPGELEAAYAMGMTKACVLRRILLPQVLRYSLPGLANVWQMSLKDSALVSVTG
IVELMRASQVAAGSTRQYFTFYIIGGLCYLVLTGLSNPLISSAEKRLGRSGKTPFASR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgttggagatgctgggattttcgagtgatggctggagcggcatgatgctgttggccgcc
ctgaccaccctgggcctgacctttgccgcgctgctggtggggtctgtgttcggcgcctgg
gtggccggcgcaaagctgtcccgccggcggttgtggcgttttttcggcgacggctattcg
gtgattttccgcggaataccggaattgctgattatttatcttttttacttcggcggttcg
ggttttttgaccgtgatcggtcggttcttcggcgcggacggctatattgaagtgccggcg
tttctcatcggcgctctggcaatcggcatgatttccggcgcttatcagggggaagtttat
cgcggcgcggtcatggcggtatcgccgggggagctggaggccgcttacgctatggggatg
accaaagcctgtgtgctgcggcggatcctgctgccgcaggtgctacgttattcgctgccg
ggcctggcgaacgtctggcaaatgagcctgaaggattcggcgctggtgtccgtaaccggc
atcgtcgagctgatgcgcgccagccaggtggccgcggggtctaccaggcagtatttcact
ttctatattatcggcggcctttgttatctggtgttgaccggtctttccaatcccttgatc
agcagcgcggagaaacgtcttggccgctcaggaaaaacgccttttgcttcccgttaa
DBGET
integrated database retrieval system
