Sodalis ligni: GTU79_04840
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Entry
GTU79_04840 CDS
T08321
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
slig
Sodalis ligni
Pathway
slig00300
Lysine biosynthesis
slig00470
D-Amino acid metabolism
slig01100
Metabolic pathways
slig01110
Biosynthesis of secondary metabolites
slig01120
Microbial metabolism in diverse environments
slig01230
Biosynthesis of amino acids
Module
slig_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GTU79_04840 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GTU79_04840 (lysA)
Enzymes [BR:
slig01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GTU79_04840 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QWA12099
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Position
1034249..1035532
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AA seq
427 aa
AA seq
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MPHSLYENAGALNANNLRSLAQRFGGPVWVYEAEIIIQRIRQLRQFDVIRFAQKACSNTH
ILRLMREHGVKVDSVSLGEIERALLAGFTPGQSPSEIVFTADVFDEPTLQRVAELGIPVN
AGSVDMLAQLGARSPGHGVWLRINPGFGHGHSQKTNTGGENSKHGIWHGDLPRAFAEIRR
YGLKLIGFHMHIGSGVDYDHLQQVCEAMVEAVIASGQDLHAISAGGGLSVPYRFGEEAIN
TEHYFGLWDAARRKISRHLGHPVTLEIEPGRFLVAEAGVLVAQVRAVKEMGSRHFVLVDA
GFNDLMRPAMYGSYHHISLIPADGRPPVEQGDRATVVAGPLCESGDVFTQLAGGGVEPRM
LPEARVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLYEQGHPRLIRRRQTLDELLALEQV
PEELPPA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgccccatagcctttatgaaaacgccggcgccttgaacgcgaataatctccgttccctg
gcgcaacgcttcggcggcccggtttgggtatatgaagcggaaattatcatccagcgcatt
cgtcagctgcggcaattcgatgttatccgtttcgcgcaaaaagcctgttccaatacgcat
atattgcgtctgatgcgggagcacggggtgaaagtggattcggtttccctgggggagatc
gaacgcgccttgctggcgggcttcacaccgggacagtcgccgagcgagatcgtgttcacc
gcggatgtgttcgacgagccgaccttgcagcgggtggcggaactggggatacctgtgaac
gccggctcggtggatatgctggcgcagctgggcgcgcgctcaccggggcacggggtctgg
ctgcggataaatccgggtttcggccatggccacagccagaaaaccaataccggcggcgaa
aacagtaaacacggcatttggcacggggatttgccgcgggctttcgccgagatccggcgc
tatggactgaagctgattggttttcatatgcatatcggctccggggtggattacgatcat
ttgcagcaggtgtgcgaggccatggtggaagccgttatcgcctccggtcaggatttgcac
gccatttccgccggcggcggtttgtccgtaccctaccggttcggcgaggaggccatcaat
accgagcactattttggcctgtgggatgccgcgcgccggaaaataagccgccatctggga
catccggtgacgctggaaattgaaccgggccgttttttggtggcggaagccggcgtgctg
gtggctcaggttcgggcggtgaaagagatgggcagccgccatttcgtgctggtggacgcc
ggattcaacgatctgatgcgcccggccatgtacggcagctatcaccatatttcgctgatc
cccgccgacggccgtccgcccgtggagcagggcgaccgtgccacggtggtggccggtccg
ttatgcgaatccggcgacgtcttcacgcagctggccggcggcggcgtggaaccgcgcatg
ctgcccgaggcgcgggtgggggattatctggtgttccatgacaccggcgcttacggcgcg
tccatgtcgtcaaactacaacagccggccgttattgccggaggtgttatatgaacaagga
cacccgcgccttattcgtcggcgccaaacgctggacgaactgctggcgctggaacaggtg
ccggaagaactccctccggcctaa
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