Sodalis ligni: GTU79_04910
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Entry
GTU79_04910 CDS
T08321
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
slig
Sodalis ligni
Pathway
slig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GTU79_04910 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slig03019
]
GTU79_04910 (rppH)
Messenger RNA biogenesis [BR:
slig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GTU79_04910 (rppH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QWA12110
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All DBs
Position
1049267..1049794
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AA seq
175 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRDGQVLWARRYGQHSWQFPQGGINAGETAEQAMYRELFEEVGL
SRKDVRILAATRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQIMCQDADINMQRGGTPE
FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFSTTVMPLQEGAPQRSCPAYRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgttggtatcgtaatctgtaatcgtgacgga
caggtcttgtgggccaggcgctacggacaacactcatggcaattcccccagggcggcatt
aatgccggcgagaccgctgagcaggcaatgtaccgtgaattgttcgaagaggtgggatta
agtcgcaaagatgtgcgcatactcgccgctacccgcaactggctgcgttacaaactgcca
aagcggctggttcgctgggacacaaagccggtctgtatcgggcaaaagcaaaagtggttt
ttgctacagattatgtgtcaggacgccgatatcaatatgcagcgcgggggcacacctgaa
tttgatggctggcgctgggtcagcttttggtaccctgtccgccaggtggtttcgttcaag
agggacgtttaccgccgggtcatgaaagaattctctaccactgtcatgccgttgcaggaa
ggcgctccgcaacggtcttgtcctgcttatcgacgaaagaggggatga
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