Sodalis ligni: GTU79_04950
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Entry
GTU79_04950 CDS
T08321
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
slig
Sodalis ligni
Pathway
slig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GTU79_04950 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slig03400
]
GTU79_04950 (recC)
Enzymes [BR:
slig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GTU79_04950 (recC)
DNA repair and recombination proteins [BR:
slig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GTU79_04950 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QWA12118
LinkDB
All DBs
Position
1056260..1059670
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AA seq
1136 aa
AA seq
DB search
MFRIYHSNQLDLLKSLAAALIEGQPLPDPFQPEVILVQSTGMAQWLQMELAARFGIAANI
EFPLPASFIWQMFTRVLPDIPAESAFSKDAMTWKLMALLPQLCEQPGFEVICRYLEDDGD
QRKCHQFAARLADLYDQYLVFRPDWLESWQRGERVTGLGEEQQWQAPLWLALVGYTARAG
QSPWHRANLYERFIHALEQAEHCPPGLPPRVFICGISALPPTYLHALQALGRHIDIHLLF
TNPCRYYWGDIRDRTFLARLQNRTRSHYQDRLEKGIFRRPEQAGSLFNDEGEQAVGNPLL
ASWGKLGRDNIFLLAQLDNAQEVDAFVDPSDEGLLSLLQRDILELEDHSWVGTSAETLSN
SRGKRLLAADDRTLSLHVCHSPQREVEVLHDQLLAMMGADAELSPRDIIVMVADIDRYTP
AIQAVFGNIATGRQLPFAISDRRARQIHPALPAFLSLLELPRSRFAAEEVLALLEVPALA
ARFAIKEEDRKLLRQWVDESGIRWGLDDENIRELMLPATGQHTWQFGLTRMLLGYAMDSH
SGDWRGILPYDESSGLIAELVGHLAELLAQLRRWRDILSRPRMLEDWLPCCRALITDFFL
PDAEAEIALALLETQWQQIVQFGLQGGLDKPVAVTLLRDELSTRLDQERVSQRFLAGTIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRSLPPMGFDLMARQPRRGDRSRRDDDRYLFLEAM
LSAQRRFYISFIGRSIQDNTLRYPSVLVSELTDYIAQSFYLAGDEDADADASAERIREHL
YQWHPRMPFAAENFIAGTELQSYAAEWLPAASAGGTPHPEFSRPLENRPIAALSFDSLKR
FYSHPVRAFFQQRLGVYFRLEERELSADEPFVIEGLTRYQLNDQLLNTLIADEDPGQLFR
KVRAAGYLPYGAFGELYWNRQCDEMSRLAETVREHRREEAHSQEVYLMLDEVELSGWLSQ
VQSDGLLRWRPGALSMKDGLSLWLEHLVWCAMGGMGESRMFGTKGEWRFAPLSPEQAKSF
LVTLVSGYVQGMNSPLLLLHRSGGAWLDYCFDRDKGDIDWSEERQRQARDKLLYAWLGDD
YMPGDSQDPYIQRLMRQLDGDRVEAIIQAAQNYLLTPFSLNLAATSEKSKRPRAAL
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaatttatcattcaaatcagttggatttacttaaatccctggccgctgccttg
attgaagggcaaccgctgccggatcccttccagccggaagtgattctggtgcaaagcacc
gggatggcccaatggctgcaaatggaattggcggcgcgtttcggtattgccgccaatatc
gaattcccgctgccggccagttttatctggcagatgtttacccgtgtattgcctgatatt
cccgcggagagcgctttttccaaggatgcaatgacctggaaactgatggccctgctgccg
cagctctgcgagcagcccgggtttgaggtgatttgccgataccttgaagacgacggcgac
cagcggaaatgccatcagtttgccgccagactggcggacctttacgatcagtacctggtg
ttccgccccgactggctggaaagctggcaacggggcgagcgggtgacgggattgggggaa
gagcaacagtggcaggccccgctctggctggcattggttgggtataccgcccgggcgggc
cagtctccttggcaccgggccaatctttatgagcgctttatccatgccctggagcaggcg
gagcactgcccgccgggattgccgccgcgcgtgttcatctgcggcatatccgcgctgccg
cccacctatctccacgctttgcaggcgctgggccgccatatcgatatccatctgctgttc
accaacccctgccgttattactggggcgacatccgcgatcggactttccttgccaggctg
cagaaccgcacgcgcagccattaccaggaccggctggagaagggtattttccgtcggccg
gagcaggccggcagcctgtttaacgacgaaggggagcaggcggtagggaatccgctgctg
gcctcatggggaaaactgggccgggataatatttttttgctggcccagctcgacaatgcc
caggaagtggatgcgtttgtcgacccttccgatgaaggactgctctccctgttacagcgg
gatatccttgaacttgaagaccatagctgggtgggaacgagcgccgagacgctgtccaac
agccggggcaaacgcctgttggcggcggatgatcggacattgagcctgcatgtctgccac
agtccgcaacgggaggtggaagtattgcatgaccagctgctggccatgatgggcgccgat
gcggaactctcgccgcgggacattatcgtgatggtggcggacattgatcgttataccccc
gctattcaggcggtattcggtaatatcgccaccggccgccagctgccgttcgccatttcc
gaccggcgggcgcgacagattcatccggcgctgccggcgttcctctccttgctggaactg
ccgcgcagccgctttgccgccgaagaggtattggcgctgctggaggtcccggccctggct
gcccgcttcgcaatcaaagaagaggatcggaaactgctccggcagtgggtggatgaatca
gggattcgctggggactggacgacgaaaatatccgcgaactgatgctgcctgccaccgga
cagcacacctggcagttcggcctgacgcgcatgctgcttggttacgccatggacagccat
agcggcgattggcgcggaatattgccctatgatgaatccagcggattgattgccgaactg
gtgggacatctggcggagctgctggcgcagctcaggcgctggcgcgacatcctgagccgg
ccacgcatgttggaggactggttgccctgttgccgggcgttgataaccgattttttcctg
ccggatgccgaagccgagatagccctggcgctgcttgaaacccaatggcagcagattgtg
cagtttggtttgcagggaggtctcgataagcctgttgccgtgaccctgctgcgggacgag
ttgtccacgcgtctggatcaagagcgggtaagccagagattcctggccgggaccatcaat
ttttgcaccctgatgccgatgcgttccatccccttcaaagtcgtctgcctgctgggcatg
aatgacggcgtctatccccgctcgctgccgccgatgggttttgatctcatggcaagacag
cccaggcgcggcgaccgcagccgccgcgacgacgatcgctacctgtttctggaggccatg
ctctcggcgcagcggcgtttttatatcagctttatcggccgctccattcaggacaatacc
ttgcgttatccttcggtgctggtgagcgagctcaccgactatatcgcccagagcttttat
ttggccggggatgaagacgctgatgcggatgccagcgccgaacggatacgtgaacatctt
taccaatggcatcccagaatgccgttcgcggcggaaaactttatcgccggaaccgaactg
caaagttatgccgcggaatggttgcccgccgccagcgccggcggcacgccccatcccgag
ttcagccggccgctggagaatcggcctatcgcggcgttgtccttcgactccctcaaacgc
ttttacagccatccggtacgcgcttttttccagcagcgcctgggggtctatttccgcctg
gaagagcgggagctctccgccgacgagccctttgtcatcgagggcctgacgcgctatcag
cttaatgatcaattgctcaataccctgattgccgacgaggaccccgggcagctattccgt
aaagtccgggccgccggctatctgccctacggcgcgttcggcgagctttactggaaccgg
cagtgcgacgaaatgtcccgtctggctgaaacggtgcgcgaacaccgccgcgaggaagcg
cacagccaggaagtgtacctgatgctggatgaggtcgaattaagcggctggctttcccag
gtgcaaagcgacggtttgctacgctggcggcccggcgctttgtccatgaaggacggactc
tccttatggctggagcacctggtctggtgcgccatgggcggcatgggtgagagccgcatg
ttcggcaccaagggagagtggcggttcgcgcctttatcccctgaacaggcaaaatcattt
ttagttacgctggtatcaggttatgttcaagggatgaattccccgctgttgttattgcac
cgttcaggcggcgcatggcttgattactgttttgaccgtgacaaaggcgacatcgactgg
agcgaagagcgccagcgccaggcacgggataaactcttgtacgcgtggctgggggacgat
tatatgcccggtgatagccaggatccctatatacagcgcctcatgcgccagttggacggg
gatcgtgtcgaggcgataatccaggccgcgcaaaactatttattaacgccgttcagcctt
aatctggccgcgacatcggaaaagtcaaagcggccccgggcggctctgtag
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